CFinderADM001245's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| hydrolase activity | 3.70E-05 | GO:0016787 |
| transmembrane transporter activity | 0.00026774 | GO:0022857 |
| benzoate biosynthesis I (CoA-dependent, β-oxidative) | 0.000688664 | plantCyc |
| plasma membrane | 0.000999181 | GO:0005886 |
| Plant hormone signal transduction | 0.00447676 | KEGG pathway |
| Golgi apparatus | 0.011910904 | GO:0005794 |
| transmembrane transport | 0.019272125 | GO:0055085 |
| metabolic process | 0.019272125 | GO:0008152 |
| integral component of membrane | 0.04560924 | GO:0016021 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T007314 | AT5G64700 (3.00E-70) | UMAMIT21|Usually multiple acids move in and out Transporters 21 |
| CRO_T008148 | AT1G26730 (6.00E-21) | EXS (ERD1/XPR1/SYG1) family protein |
| CRO_T019372 | AT3G05120 (3.00E-153) | ATGID1A|GA INSENSITIVE DWARF1A |
| CRO_T025164 | AT4G25434 (3.00E-87) | ATNUDT10|nudix hydrolase homolog 10 |
| CRO_T025211 | - | - |
| CRO_T026583 | AT2G28130 (1.00E-95) | unknown protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM000821 | regulation of organ formation nitrate import peptide hormone binding iron ion homeostasis xylem and phloem pattern formation NAD+ ADP-ribosyltransferase activity Golgi transport complex integral component of membrane activation of MAPKK activity recognition of pollen MAP kinase kinase kinase activity signal transducer activity MAPK cascade Transcription_related, Transcription factor: C2C2-Dof Protein_kinases_phosphatases, PPC:1.9.2: S Domain Kinase (Type 2) drug transmembrane transport signal transduction defense response drug transmembrane transporter activity Transcription_related, Transcription factor: bHLH Transcription_related, Transcription factor: C2H2 antiporter activity Protein_kinases_phosphatases, PPC:1.12.4: Leucine Rich Repeat Kinase XI & XII 2-alkenal reductase [NAD(P)] activity carbohydrate binding anchored component of plasma membrane transporter activity | details |
| CFinderADM000848 | metabolic process rRNA modification box C/D snoRNP complex benzoate biosynthesis I (CoA-dependent, β-oxidative) Protein_kinases_phosphatases, PPC:4.2.4: SNF1 Related Protein Kinase (SnRK) snoRNA binding small-subunit processome Transcription_related, Transcription factor: C2H2 Transcription_related, Transcription factor: ERF MAPK signaling pathway - plant Ribosome biogenesis in eukaryotes Plant hormone signal transduction hydrolase activity, hydrolyzing O-glycosyl compounds protein phosphorylation binding hydrolase activity protein serine/threonine kinase activity | details |
| CFinderADM001345 | hydroquinone glucosyltransferase activity oligopeptide transport flavonoid glucuronidation flavonoid biosynthetic process quercetin 7-O-glucosyltransferase activity quercetin 3-O-glucosyltransferase activity transporter activity formation of glycosidic bonds, GlycosylTransferases: GTnc intracellular membrane-bounded organelle hydrolase activity | details |
| CFinderADM001594 | Cytochrome_P450, Cytochrome P450: CYP706A folate polyglutamylation II glutamate removal from folates gamma-glutamyl-peptidase activity tetrahydrofolylpolyglutamate metabolic process proteasome regulatory particle assembly Folate biosynthesis Viral carcinogenesis magnesium ion transport glutamine metabolic process magnesium ion transmembrane transport magnesium ion transmembrane transporter activity proteasome regulatory particle, base subcomplex secondary metabolite biosynthetic process oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen vacuole proteolysis iron ion binding heme binding hydrolase activity | details |
| CFinderADM001882 | phosphorylated carbohydrate dephosphorylation sugar-phosphatase activity clathrin vesicle coat hydrolase activity starch binding protein tyrosine/serine/threonine phosphatase activity starch catabolic process starch degradation II triacylglycerol degradation vesicle-mediated transport protein dephosphorylation endomembrane system | details |
| CFinderADM002047 | transcription factor TFIIF complex hydroquinone glucosyltransferase activity transcription factor activity, core RNA polymerase II binding positive regulation of transcription elongation from RNA polymerase II promoter positive regulation of transcription initiation from RNA polymerase II promoter Basal transcription factors transcription from RNA polymerase II promoter quercetin 3-O-glucosyltransferase activity quercetin 7-O-glucosyltransferase activity flavonoid glucuronidation flavonoid biosynthetic process intracellular membrane-bounded organelle formation of glycosidic bonds, GlycosylTransferases: GTnc hydrolase activity | details |
| CFinderADM002186 | peptide hormone binding nitrate import xylem and phloem pattern formation activation of MAPKK activity MAP kinase kinase kinase activity Transcription_related, Transcription factor: C2C2-Dof MAPK cascade Protein_kinases_phosphatases, PPC:1.12.4: Leucine Rich Repeat Kinase XI & XII 2-alkenal reductase [NAD(P)] activity intracellular | details |
Expression profiles
 Show details about module gene expression profiling |