CFinderADM001291's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Ubiquitin_Proteasome_system, E3: RING | 2.49E-05 | ubs family |
| Ubiquitin_Proteasome_system, DUB: OTU | 0.000341952 | ubs family |
| Transcription_related, Transcription factor: WRKY | 0.000468238 | TF family |
| membrane | 0.000524235 | GO:0016020 |
| metal ion binding | 0.000627177 | GO:0046872 |
| sequence-specific DNA binding | 0.009049302 | GO:0043565 |
| transcription factor activity, sequence-specific DNA binding | 0.012544815 | GO:0003700 |
| regulation of transcription, DNA-templated | 0.028142694 | GO:0006355 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T006045 | AT3G57810 (1.00E-48) | Cysteine proteinases superfamily protein |
| CRO_T016439 | - | - |
| CRO_T022585 | AT1G13960 (1.00E-61) | WRKY4|WRKY DNA-binding protein 4 |
| CRO_T032975 | - | - |
| CRO_T033049 | AT3G28430 (2.00E-23) | unknown protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM001149 | Fatty acid metabolism 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity actin filament binding protein binding, bridging fatty acid elongation -- saturated octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) actin filament organization stearate biosynthesis II (bacteria and plants) palmitate biosynthesis II (bacteria and plants) very long chain fatty acid biosynthesis I very long chain fatty acid biosynthesis II NAD binding hydrolase activity, hydrolyzing O-glycosyl compounds ubiquitin-protein transferase activity fatty acid biosynthetic process Ubiquitin_Proteasome_system, E3: U-box protein ubiquitination carbohydrate metabolic process Ubiquitin_Proteasome_system, E3: RING | details |
| CFinderADM001531 | Ubiquitin_Proteasome_system, E3: RING peptidyl-proline hydroxylation to 4-hydroxy-L-proline procollagen-proline 4-dioxygenase activity 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity fatty acid elongation -- saturated octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) L-ascorbic acid binding Arginine and proline metabolism stearate biosynthesis II (bacteria and plants) metal ion binding Fatty acid metabolism palmitate biosynthesis II (bacteria and plants) NAD binding fatty acid biosynthetic process membrane oxidation-reduction process endoplasmic reticulum membrane iron ion binding | details |
Expression profiles
 Show details about module gene expression profiling |