CFinderADM001531's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Ubiquitin_Proteasome_system, E3: RING | 5.09E-06 | ubs family |
| peptidyl-proline hydroxylation to 4-hydroxy-L-proline | 1.15E-05 | GO:0018401 |
| procollagen-proline 4-dioxygenase activity | 3.07E-05 | GO:0004656 |
| 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity | 3.07E-05 | GO:0004316 |
| fatty acid elongation -- saturated | 0.000155223 | plantCyc |
| octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) | 0.000196766 | plantCyc |
| L-ascorbic acid binding | 0.000204273 | GO:0031418 |
| Arginine and proline metabolism | 0.000303184 | KEGG pathway |
| stearate biosynthesis II (bacteria and plants) | 0.000317971 | plantCyc |
| metal ion binding | 0.000397196 | GO:0046872 |
| Fatty acid metabolism | 0.000593774 | KEGG pathway |
| palmitate biosynthesis II (bacteria and plants) | 0.000700029 | plantCyc |
| NAD binding | 0.001281095 | GO:0051287 |
| fatty acid biosynthetic process | 0.001302395 | GO:0006633 |
| membrane | 0.001456208 | GO:0016020 |
| oxidation-reduction process | 0.001669179 | GO:0055114 |
| endoplasmic reticulum membrane | 0.002257342 | GO:0005789 |
| iron ion binding | 0.012215433 | GO:0005506 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T016439 | - | - |
| CRO_T028501 | AT2G30670 (7.00E-25) | NAD(P)-binding Rossmann-fold superfamily protein |
| CRO_T030626 | AT2G17720 (4.00E-106) | P4H5|prolyl 4-hydroxylase 5 |
| CRO_T032975 | - | - |
| CRO_T033049 | AT3G28430 (2.00E-23) | unknown protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM000325 | Cytochrome_P450, Cytochrome P450: CYP714A 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity fatty acid elongation -- saturated UDP-D-xylose biosynthesis gibberellin biosynthesis III (early C-13 hydroxylation) octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) stearate biosynthesis II (bacteria and plants) palmitate biosynthesis II (bacteria and plants) Amino sugar and nucleotide sugar metabolism Fatty acid metabolism fatty acid biosynthetic process oxidation-reduction process NAD binding monooxygenase activity oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen binding iron ion binding heme binding integral component of membrane | details |
| CFinderADM000482 | 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity fatty acid elongation -- saturated cytokinin-O-glucosides biosynthesis octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) stearate biosynthesis II (bacteria and plants) palmitate biosynthesis II (bacteria and plants) Fatty acid metabolism Plant-pathogen interaction oxidation-reduction process fatty acid biosynthetic process flavonoid biosynthetic process flavonoid glucuronidation NAD binding quercetin 3-O-glucosyltransferase activity quercetin 7-O-glucosyltransferase activity calcium ion binding formation of glycosidic bonds, GlycosylTransferases: GTnc intracellular membrane-bounded organelle oxidoreductase activity | details |
| CFinderADM000643 | calcium-dependent cysteine-type endopeptidase activity 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity fatty acid elongation -- saturated octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) stearate biosynthesis II (bacteria and plants) Transcription_related, Transcription factor: bZIP benzoate biosynthesis I (CoA-dependent, β-oxidative) palmitate biosynthesis II (bacteria and plants) Fatty acid metabolism Plant-pathogen interaction quercetin 7-O-glucosyltransferase activity protein heterodimerization activity quercetin 3-O-glucosyltransferase activity NAD binding membrane fatty acid biosynthetic process flavonoid glucuronidation flavonoid biosynthetic process sequence-specific DNA binding intracellular membrane-bounded organelle formation of glycosidic bonds, GlycosylTransferases: GTnc transcription factor activity, sequence-specific DNA binding hydrolase activity metabolic process proteolysis | details |
| CFinderADM001149 | Fatty acid metabolism 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity actin filament binding protein binding, bridging fatty acid elongation -- saturated octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) actin filament organization stearate biosynthesis II (bacteria and plants) palmitate biosynthesis II (bacteria and plants) very long chain fatty acid biosynthesis I very long chain fatty acid biosynthesis II NAD binding hydrolase activity, hydrolyzing O-glycosyl compounds ubiquitin-protein transferase activity fatty acid biosynthetic process Ubiquitin_Proteasome_system, E3: U-box protein ubiquitination carbohydrate metabolic process Ubiquitin_Proteasome_system, E3: RING | details |
| CFinderADM001291 | Ubiquitin_Proteasome_system, E3: RING Ubiquitin_Proteasome_system, DUB: OTU Transcription_related, Transcription factor: WRKY membrane metal ion binding sequence-specific DNA binding transcription factor activity, sequence-specific DNA binding regulation of transcription, DNA-templated | details |
| CFinderADM001671 | L,L-diaminopimelate aminotransferase activity 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity systemic acquired resistance, salicylic acid mediated signaling pathway lysine biosynthetic process via diaminopimelate fatty acid elongation -- saturated L-lysine biosynthesis VI octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) stearate biosynthesis II (bacteria and plants) response to cytokinin Transcription_related, Transcription factor: M-type palmitate biosynthesis II (bacteria and plants) Fatty acid metabolism fatty acid biosynthetic process Biosynthesis of amino acids NAD binding copper ion binding pyridoxal phosphate binding chloroplast stroma | details |
Expression profiles
 Show details about module gene expression profiling |