CFinderADM001382's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| posttranscriptional regulation of gene expression | 7.52E-06 | GO:0010608 |
| heat acclimation | 1.25E-05 | GO:0010286 |
| translational elongation | 0.000438407 | GO:0006414 |
| DNA replication | 0.000671324 | KEGG pathway |
| nucleotidyltransferase activity | 0.001950887 | GO:0016779 |
| translation elongation factor activity | 0.001950887 | GO:0003746 |
| Ribosome | 0.007266035 | KEGG pathway |
| Purine metabolism | 0.007758459 | KEGG pathway |
| RNA transport | 0.007758459 | KEGG pathway |
| Spliceosome | 0.007758459 | KEGG pathway |
| GTPase activity | 0.0100909 | GO:0003924 |
| GTP binding | 0.022678872 | GO:0005525 |
| catalytic activity | 0.027008227 | GO:0003824 |
| nucleic acid binding | 0.037353201 | GO:0003676 |
| RNA binding | 0.037353201 | GO:0003723 |
| nucleotide binding | 0.046225542 | GO:0000166 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T001965 | AT1G06220 (0) | CLO|CLOTHO; GFA1|GAMETOPHYTE FACTOR 1; MEE5|MATERNAL EFFECT EMBRYO ARREST 5 |
| CRO_T003138 | AT1G49760 (6.00E-46) | PAB8|poly(A) binding protein 8 |
| CRO_T004162 | AT4G21320 (9.00E-132) | HSA32|HEAT-STRESS-ASSOCIATED 32 |
| CRO_T009917 | AT1G50840 (0) | POLGAMMA2|polymerase gamma 2; PolIA|polymerase I A |
| CRO_T010277 | - | - |
| CRO_T010449 | AT3G51100 (9.00E-24) | unknown protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM001383 | maltose metabolic process alpha-1,4-glucosidase activity maltose alpha-glucosidase activity translational elongation translation elongation factor activity N-Glycan biosynthesis Ribosome carbohydrate binding GTPase activity Spliceosome GTP binding | details |
| CFinderADM001384 | ubiquinone-6 biosynthetic process maltose metabolic process alpha-1,4-glucosidase activity maltose alpha-glucosidase activity NADH dehydrogenase activity translational elongation translation elongation factor activity N-Glycan biosynthesis carbohydrate binding GTPase activity Spliceosome GTP binding Ribosome | details |
| CFinderADM001455 | core mediator complex RNA polymerase II transcription cofactor activity mediator complex regulation of transcription from RNA polymerase II promoter Transcription_related, Transcription regulator: MED7 mitochondrion | details |
| CFinderADM001462 | RNA polymerase III core binding negative regulation of transcription from RNA polymerase III promoter transcription factor TFIIIB complex assembly transcription, DNA-templated solute:proton antiporter activity cytoplasm hydrogen ion transmembrane transport nucleus mRNA surveillance pathway | details |
| CFinderADM001691 | posttranscriptional regulation of gene expression heat acclimation cell part small GTPase mediated signal transduction catalytic activity GTP binding intracellular | details |
| CFinderADM001869 | adenosine ribonucleotides de novo biosynthesis vacuolar proton-transporting V-type ATPase complex H3 histone acetyltransferase activity histone acetyltransferase complex histone H3 acetylation root morphogenesis Notch signaling pathway hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances Transcription_related, Transcription regulator: GNAT flower development response to light stimulus proton transport mRNA surveillance pathway RNA transport Oxidative phosphorylation transmembrane transport RNA binding nucleotide binding DNA binding cytoplasm | details |
Expression profiles
 Show details about module gene expression profiling |