CFinderADM001462's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| RNA polymerase III core binding | 1.12E-12 | GO:0000994 |
| negative regulation of transcription from RNA polymerase III promoter | 1.46E-12 | GO:0016480 |
| transcription factor TFIIIB complex assembly | 1.46E-12 | GO:0070217 |
| transcription, DNA-templated | 6.20E-06 | GO:0006351 |
| solute:proton antiporter activity | 2.29E-05 | GO:0015299 |
| cytoplasm | 0.00027662 | GO:0005737 |
| hydrogen ion transmembrane transport | 0.000720036 | GO:1902600 |
| nucleus | 0.00073605 | GO:0005634 |
| mRNA surveillance pathway | 0.000830859 | KEGG pathway |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T000374 | AT5G13240 (1.00E-51) | transcription regulators |
| CRO_T000982 | AT5G13240 (4.00E-53) | transcription regulators |
| CRO_T010277 | - | - |
| CRO_T015840 | AT1G27595 (2.00E-22) | |
| CRO_T028635 | AT5G11800 (2.00E-148) | ATKEA6|K+ EFFLUX ANTIPORTER 6 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM001382 | posttranscriptional regulation of gene expression heat acclimation translational elongation DNA replication nucleotidyltransferase activity translation elongation factor activity Ribosome Purine metabolism RNA transport Spliceosome GTPase activity GTP binding catalytic activity nucleic acid binding RNA binding nucleotide binding | details |
| CFinderADM001383 | maltose metabolic process alpha-1,4-glucosidase activity maltose alpha-glucosidase activity translational elongation translation elongation factor activity N-Glycan biosynthesis Ribosome carbohydrate binding GTPase activity Spliceosome GTP binding | details |
| CFinderADM001455 | core mediator complex RNA polymerase II transcription cofactor activity mediator complex regulation of transcription from RNA polymerase II promoter Transcription_related, Transcription regulator: MED7 mitochondrion | details |
| CFinderADM001463 | arogenate dehydratase activity RNA polymerase III core binding prephenate dehydratase activity transcription factor TFIIIB complex assembly negative regulation of transcription from RNA polymerase III promoter L-phenylalanine biosynthetic process L-phenylalanine biosynthesis II L-phenylalanine biosynthesis III (cytosolic, plants) amino acid binding cell part Biosynthesis of amino acids small GTPase mediated signal transduction GTP binding transcription, DNA-templated | details |
Expression profiles
 Show details about module gene expression profiling |