CFinderADM001412's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| wogonin metabolism | 9.82E-06 | plantCyc |
| baicalein degradation (hydrogen peroxide detoxification) | 1.47E-05 | plantCyc |
| hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc | 1.73E-05 | cazy family |
| Ubiquitin_Proteasome_system, DUB: JAMM | 6.05E-05 | ubs family |
| nucleotide binding | 8.55E-05 | GO:0000166 |
| Glycosaminoglycan degradation | 9.00E-05 | KEGG pathway |
| ABC transporters | 0.000341952 | KEGG pathway |
| hydrolase activity, acting on glycosyl bonds | 0.000421827 | GO:0016798 |
| ATPase activity | 0.000999121 | GO:0016887 |
| ATPase activity, coupled to transmembrane movement of substances | 0.001577049 | GO:0042626 |
| Endocytosis | 0.001914827 | KEGG pathway |
| membrane | 0.00256875 | GO:0016020 |
| Ubiquitin_Proteasome_system, E3 adaptor: F-box | 0.006077966 | ubs family |
| transmembrane transport | 0.014600488 | GO:0055085 |
| carbohydrate metabolic process | 0.014600488 | GO:0005975 |
| transport | 0.014600488 | GO:0006810 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T004222 | AT1G48790 (2.00E-66) | AMSH1|associated molecule with the SH3 domain of STAM 1 |
| CRO_T017822 | AT5G07830 (0) | AtGUS2|glucuronidase 2 |
| CRO_T020358 | AT5G46540 (3.00E-98) | ABCB7|ATP-binding cassette B7; PGP7|P-glycoprotein 7 |
| CRO_T020384 | AT1G70610 (0) | ABCB26|ATP-binding cassette B26; ATTAP1|transporter associated with antigen processing protein 1 |
| CRO_T031734 | - | - |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM000282 | alpha-1,2-mannosyltransferase activity formation of glycosidic bonds, GlycosylTransferases: GTnc hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc wogonin metabolism baicalein degradation (hydrogen peroxide detoxification) mannosylation Protein_kinases_phosphatases, PPC:1.10.1: Receptor Like Cytoplasmic Kinase VI Glycosaminoglycan degradation protein N-glycosylation (eukaryotic, high mannose) detoxification of reactive carbonyls in chloroplasts ER-associated ubiquitin-dependent protein catabolic process hydrolase activity, acting on glycosyl bonds Fatty acid metabolism N-Glycan biosynthesis carbohydrate metabolic process endoplasmic reticulum | details |
| CFinderADM001110 | steroid binding skotomorphogenesis microtubule bundle formation detection of brassinosteroid stimulus anther wall tapetum cell differentiation regulation of seedling development negative regulation of cell death Protein_kinases_phosphatases, PPC:1.14.1: Crinkly 4 Like Kinase ATP binding protein serine/threonine kinase activity positive regulation of flower development pollen exine formation brassinosteroid mediated signaling pathway MAP kinase activity response to UV-B protein phosphorylation leaf development Protein_kinases_phosphatases, PPC:4.5.1: MAPK Family MAPK cascade NF-kappa B signaling pathway protein homodimerization activity protein heterodimerization activity defense response Protein_kinases_phosphatases, PPC:1.12.4: Leucine Rich Repeat Kinase XI & XII Plant hormone signal transduction endosome Ubiquitin_Proteasome_system, E3 adaptor: F-box intracellular | details |
| CFinderADM001258 | mitochondrial protein processing protein import into mitochondrial intermembrane space protein complex assembly mitochondrial fusion cristae formation Transcription_related, Transcription factor: EIL oligopeptide transport ATP-dependent peptidase activity metalloendopeptidase activity MAPK signaling pathway - plant mitochondrial inner membrane Ubiquitin_Proteasome_system, E3 adaptor: F-box transporter activity chloroplast thylakoid membrane transcription factor activity, sequence-specific DNA binding regulation of transcription, DNA-templated | details |
| CFinderADM001411 | hydrolysis of carbohydrate esters, Carbohydrate Esterases: CE8 tissue development plant organ development anatomical structure morphogenesis cellular response to stimulus regulation of response to stimulus response to organic substance response to bacterium Ubiquitin_Proteasome_system, DUB: JAMM defense response to other organism response to osmotic stress lipid binding single-organism cellular process response to stress regulation of cellular process Endocytosis MAPK signaling pathway - plant Ubiquitin_Proteasome_system, E3 adaptor: F-box transport regulation of transcription, DNA-templated | details |
| CFinderADM001765 | hydroxyjasmonate sulfate biosynthesis indole-3-acetate activation I wogonin metabolism hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc Glycosaminoglycan degradation baicalein degradation (hydrogen peroxide detoxification) SCF ubiquitin ligase complex SCF-dependent proteasomal ubiquitin-dependent protein catabolic process hydrolase activity, acting on glycosyl bonds response to stress formation of glycosidic bonds, GlycosylTransferases: GTnc ubiquitin-protein transferase activity Ubiquitin_Proteasome_system, E3 adaptor: F-box carbohydrate metabolic process metabolic process hydrolase activity | details |
Expression profiles
 Show details about module gene expression profiling |