CFinderADM001436's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| formation of glycosidic bonds, GlycosylTransferases: GTnc | 1.02E-05 | cazy family |
| Transcription_related, Transcription factor: Alfin-like | 1.27E-05 | TF family |
| glycogen catabolic process | 3.76E-05 | GO:0005980 |
| glycogen phosphorylase activity | 7.86E-05 | GO:0008184 |
| Transcription_related, Transcription factor: MIKC | 0.000168675 | TF family |
| amyloplast | 0.000229759 | GO:0009501 |
| response to water deprivation | 0.000921805 | GO:0009414 |
| identical protein binding | 0.002461432 | GO:0042802 |
| Starch and sucrose metabolism | 0.002958077 | KEGG pathway |
| protein dimerization activity | 0.008070061 | GO:0046983 |
| pyridoxal phosphate binding | 0.008070061 | GO:0030170 |
| chloroplast stroma | 0.018897818 | GO:0009570 |
| transcription factor activity, sequence-specific DNA binding | 0.028196704 | GO:0003700 |
| transcription, DNA-templated | 0.028242483 | GO:0006351 |
| regulation of transcription, DNA-templated | 0.048872601 | GO:0006355 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T002687 | AT2G02470 (3.00E-60) | AL6|alfin-like 6 |
| CRO_T007797 | AT3G29320 (0) | PHS1|alpha-glucan phosphorylase 1 |
| CRO_T008953 | AT4G37940 (2.00E-31) | AGL21|AGAMOUS-like 21 |
| CRO_T009611 | AT3G14860 (3.00E-145) | NHL domain-containing protein |
| CRO_T017441 | AT1G33920 (4.00E-24) | ATPP2-A4|phloem protein 2-A4 |
| CRO_T021874 | AT3G21295 (3.00E-24) | Tudor/PWWP/MBT superfamily protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM000784 | Starch and sucrose metabolism formation of glycosidic bonds, GlycosylTransferases: GTnc racemase and epimerase activity, acting on amino acids and derivatives glycogen phosphorylase activity glycogen catabolic process ubiquinol-cytochrome-c reductase activity trehalose biosynthetic process nitrogen compound metabolic process aerobic respiration I (cytochrome c) amyloplast response to water deprivation 2 iron, 2 sulfur cluster binding identical protein binding respiratory chain hydrogen ion transmembrane transport mitochondrial inner membrane pyridoxal phosphate binding Oxidative phosphorylation transferase activity chloroplast stroma | details |
| CFinderADM000996 | pyrimidine ribonucleosides salvage II purine nucleosidase activity purine nucleoside catabolic process adenine and adenosine salvage II cytokinesis guanosine nucleotides degradation I ubiquinol-cytochrome-c reductase activity pyrimidine salvage pathway cellular water homeostasis water transport microtubule cytoskeleton organization glycerol transport adenosine nucleotides degradation I water channel activity glycerol channel activity Transcription_related, Transcription factor: B3 Pyrimidine metabolism aerobic respiration I (cytochrome c) ion transmembrane transport 2 iron, 2 sulfur cluster binding microtubule binding hydrogen ion transmembrane transport respiratory chain mitochondrial inner membrane transporter activity Oxidative phosphorylation transport integral component of plasma membrane integral component of membrane | details |
| CFinderADM001435 | Starch and sucrose metabolism formation of glycosidic bonds, GlycosylTransferases: GTnc ErbB signaling pathway glycogen phosphorylase activity rRNA (uridine-N3-)-methyltransferase activity Protein_kinases_phosphatases, PPC:4.5.4: GSK3/Shaggy Like Protein Kinase Family glycogen catabolic process rRNA base methylation amyloplast Lysine degradation response to water deprivation identical protein binding pyridoxal phosphate binding hydrolase activity, hydrolyzing O-glycosyl compounds chloroplast stroma carbohydrate metabolic process protein serine/threonine kinase activity protein phosphorylation | details |
| CFinderADM001750 | adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc organic substance metabolic process hydrolase activity, acting on glycosyl bonds Starch and sucrose metabolism | details |
| CFinderADM001943 | beta-sitosterol UDP-glucosyltransferase activity Transcription_related, Transcription factor: Alfin-like lipid glycosylation seed development metal ion binding sterol metabolic process multicellular organism development Transcription_related, Transcription factor: ERF formation of glycosidic bonds, GlycosylTransferases: GTnc transcription factor activity, sequence-specific DNA binding carbohydrate metabolic process Ubiquitin_Proteasome_system, E3: RING transcription, DNA-templated regulation of transcription, DNA-templated DNA binding | details |
| CFinderADM002085 | GPI-anchor transamidase complex attachment of GPI anchor to protein Glycosylphosphatidylinositol(GPI)-anchor biosynthesis | details |
| CFinderADM002109 | formation of glycosidic bonds, GlycosylTransferases: GTnc glycogen catabolic process glycogen phosphorylase activity ubiquinol-cytochrome-c reductase activity aerobic respiration I (cytochrome c) amyloplast response to water deprivation 2 iron, 2 sulfur cluster binding identical protein binding respiratory chain hydrogen ion transmembrane transport mitochondrial inner membrane pyridoxal phosphate binding Starch and sucrose metabolism Oxidative phosphorylation binding chloroplast stroma | details |
Expression profiles
 Show details about module gene expression profiling |