CFinderADM001479's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| regulation of lipid metabolic process | 5.76E-06 | GO:0019216 |
| anion transmembrane transport | 5.75E-05 | GO:0098656 |
| inorganic phosphate transmembrane transporter activity | 8.72E-05 | GO:0005315 |
| Plant-pathogen interaction | 0.002769341 | KEGG pathway |
| calcium ion binding | 0.00639795 | GO:0005509 |
| Protein processing in endoplasmic reticulum | 0.010886735 | KEGG pathway |
| plastid | 0.019213884 | GO:0009536 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T000859 | AT5G07490 (4.00E-13) | unknown protein |
| CRO_T005916 | AT3G07490 (3.00E-21) | AGD11|ARF-GAP domain 11; CML3|calmodulin-like 3 |
| CRO_T008637 | AT1G28510 (7.00E-53) | Optic atrophy 3 protein (OPA3) |
| CRO_T015303 | AT2G38060 (9.00E-177) | PHT4; 2|phosphate transporter 4; 2 |
| CRO_T016528 | - | - |
| CRO_T020324 | AT2G01650 (1.00E-125) | PUX2|plant UBX domain-containing protein 2 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM000593 | auxin efflux transmembrane transporter activity auxin homeostasis auxin efflux pollen development auxin-activated signaling pathway auxin polar transport Plant-pathogen interaction calcium ion binding Ubiquitin_Proteasome_system, E3: RING transmembrane transport | details |
| CFinderADM000644 | nucleoside-triphosphatase activity pseudouridine synthesis microtubule cytoskeleton cytoskeletal part tRNA processing pseudouridine synthase activity Transcription_related, Transcription regulator: SNF2 single-organism cellular process Homologous recombination RNA binding nucleotide binding | details |
| CFinderADM000754 | strand invasion DNA recombinase assembly mitotic recombination response to ionizing radiation DNA topoisomerase activity endodeoxyribonuclease activity four-way junction DNA binding recombinase activity DNA-dependent ATPase activity single-stranded DNA binding double-stranded DNA binding Homologous recombination Plant-pathogen interaction calcium ion binding | details |
| CFinderADM001045 | formation of glycosidic bonds, GlycosylTransferases: GTnc | details |
| CFinderADM001046 | Protein_kinases_phosphatases, PPC:4.5.2: CDC2 Like Kinase Family Endocytosis formation of glycosidic bonds, GlycosylTransferases: GTnc protein phosphorylation | details |
| CFinderADM001293 | regulation of lipid metabolic process protein homooligomerization response to biotic stimulus calmodulin binding defense response plastid | details |
| CFinderADM001656 | Transcription_related, Transcription regulator: SET Plant-pathogen interaction calcium ion binding | details |
| CFinderADM001860 | mitochondrial RNA metabolic process pyrimidine ribonucleosides salvage I post-chaperonin tubulin folding pathway tubulin complex assembly beta-tubulin binding microtubule cytoskeleton organization RNA modification positive regulation of GTPase activity GTPase activator activity Plant-pathogen interaction cytosol embryo development ending in seed dormancy microtubule cytoplasmic part formation of glycosidic bonds, GlycosylTransferases: GTnc calcium ion binding kinase activity phosphorylation intracellular membrane-bounded organelle plasmodesma RNA binding | details |
| CFinderADM002011 | mitochondrial RNA metabolic process RNA modification Plant-pathogen interaction cytoplasmic part calcium ion binding intracellular membrane-bounded organelle formation of glycosidic bonds, GlycosylTransferases: GTnc | details |
Expression profiles
 Show details about module gene expression profiling |