CFinderADM001499's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc | 6.60E-06 | cazy family |
| N-glycan processing | 1.47E-05 | GO:0006491 |
| autophagosome assembly | 1.47E-05 | GO:0000045 |
| mannosyl-oligosaccharide 1,2-alpha-mannosidase activity | 4.78E-05 | GO:0004571 |
| pre-autophagosomal structure | 6.15E-05 | GO:0000407 |
| Autophagy - animal | 0.000172685 | KEGG pathway |
| Viral carcinogenesis | 0.000172685 | KEGG pathway |
| N-Glycan biosynthesis | 0.00052647 | KEGG pathway |
| Golgi membrane | 0.001759775 | GO:0000139 |
| endoplasmic reticulum | 0.006546197 | GO:0005783 |
| sequence-specific DNA binding | 0.006692438 | GO:0043565 |
| calcium ion binding | 0.006692438 | GO:0005509 |
| hydrolase activity | 0.018038106 | GO:0016787 |
| integral component of membrane | 0.026100395 | GO:0016021 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T011227 | AT5G26040 (2.00E-54) | HDA2|histone deacetylase 2 |
| CRO_T012846 | AT2G03780 (9.00E-106) | Translin family protein |
| CRO_T015221 | AT5G66930 (4.00E-49) | unknown protein |
| CRO_T017617 | AT1G51590 (5.00E-145) | MANIB|ALPHA-MANNOSIDASE IB; MNS1|alpha-mannosidase 1 |
| CRO_T021481 | - | - |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM001920 | very long chain fatty acid biosynthesis I transferase activity, transferring acyl groups carbohydrate transport intracellular protein transport metabolic process intracellular | details |
| CFinderADM001983 | hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc protein import into chloroplast stroma N-glycan processing protein import into mitochondrial matrix integral component of mitochondrial inner membrane mitochondrial inner membrane presequence translocase complex mannosyl-oligosaccharide 1,2-alpha-mannosidase activity protein channel activity ribosomal large subunit assembly mitochondrial large ribosomal subunit Necroptosis nucleosome N-Glycan biosynthesis Golgi membrane protein heterodimerization activity rRNA binding endoplasmic reticulum calcium ion binding translation Ribosome structural constituent of ribosome | details |
| CFinderADM001985 | hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc N-glycan processing regulation of stomatal movement protein import into chloroplast stroma Notch signaling pathway Golgi-associated vesicle mitochondrial inner membrane presequence translocase complex integral component of mitochondrial inner membrane protein import into mitochondrial matrix actin filament organization mannosyl-oligosaccharide 1,2-alpha-mannosidase activity protein channel activity Necroptosis N-Glycan biosynthesis nucleosome actin binding protein heterodimerization activity Golgi membrane calcium ion binding endoplasmic reticulum | details |
| CFinderADM002163 | phosphoric ester hydrolase activity phosphatidylinositol-3-phosphate biosynthetic process vacuole organization autophagosome assembly pre-autophagosomal structure Autophagy - animal 3-phosphoinositide biosynthesis Transcription_related, Transcription factor: C3H transporter activity transport intracellular RNA binding integral component of membrane | details |
| CFinderADM002267 | Ubiquitin_Proteasome_system, E3: HECT Ubiquitin mediated proteolysis ligase activity ubiquitin-protein transferase activity hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc mannosyl-oligosaccharide 1,2-alpha-mannosidase activity N-glycan processing RNA modification N-Glycan biosynthesis Transcription_related, Transcription factor: B3 protein ubiquitination involved in ubiquitin-dependent protein catabolic process protein ubiquitination calcium ion binding Golgi membrane binding endoplasmic reticulum | details |
Expression profiles
 Show details about module gene expression profiling |