CFinderADM002267's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Ubiquitin_Proteasome_system, E3: HECT | 7.70E-11 | ubs family |
| Ubiquitin mediated proteolysis | 1.05E-07 | KEGG pathway |
| ligase activity | 4.01E-07 | GO:0016874 |
| ubiquitin-protein transferase activity | 4.11E-07 | GO:0004842 |
| hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc | 1.08E-05 | cazy family |
| mannosyl-oligosaccharide 1,2-alpha-mannosidase activity | 2.15E-05 | GO:0004571 |
| N-glycan processing | 7.68E-05 | GO:0006491 |
| RNA modification | 0.000130408 | GO:0009451 |
| N-Glycan biosynthesis | 0.000298453 | KEGG pathway |
| Transcription_related, Transcription factor: B3 | 0.000380013 | TF family |
| protein ubiquitination involved in ubiquitin-dependent protein catabolic process | 0.000692573 | GO:0042787 |
| protein ubiquitination | 0.00351088 | GO:0016567 |
| calcium ion binding | 0.004494345 | GO:0005509 |
| Golgi membrane | 0.004741165 | GO:0000139 |
| binding | 0.011214436 | GO:0005488 |
| endoplasmic reticulum | 0.017636691 | GO:0005783 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T014908 | - | - |
| CRO_T015589 | AT2G30320 (1.00E-05) | Pseudouridine synthase family protein |
| CRO_T017617 | AT1G51590 (5.00E-145) | MANIB|ALPHA-MANNOSIDASE IB; MNS1|alpha-mannosidase 1 |
| CRO_T028522 | AT3G17205 (5.00E-57) | UPL6|ubiquitin protein ligase 6 |
| CRO_T028523 | AT3G17205 (3.00E-78) | UPL6|ubiquitin protein ligase 6 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM001448 | centrosome duplication interphase microtubule nucleation by interphase microtubule organizing center mitotic spindle assembly growth cortical microtubule organization response to nematode meiotic nuclear division gamma-tubulin complex equatorial microtubule organizing center gamma-tubulin binding microtubule minus-end binding phosphatidylinositol phosphate kinase activity RNA modification structural constituent of cytoskeleton 3-phosphoinositide biosynthesis phosphatidylinositol phosphorylation Inositol phosphate metabolism microtubule Ribosome plasmodesma translation binding structural constituent of ribosome | details |
| CFinderADM001499 | hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc N-glycan processing autophagosome assembly mannosyl-oligosaccharide 1,2-alpha-mannosidase activity pre-autophagosomal structure Autophagy - animal Viral carcinogenesis N-Glycan biosynthesis Golgi membrane endoplasmic reticulum sequence-specific DNA binding calcium ion binding hydrolase activity integral component of membrane | details |
| CFinderADM001983 | hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc protein import into chloroplast stroma N-glycan processing protein import into mitochondrial matrix integral component of mitochondrial inner membrane mitochondrial inner membrane presequence translocase complex mannosyl-oligosaccharide 1,2-alpha-mannosidase activity protein channel activity ribosomal large subunit assembly mitochondrial large ribosomal subunit Necroptosis nucleosome N-Glycan biosynthesis Golgi membrane protein heterodimerization activity rRNA binding endoplasmic reticulum calcium ion binding translation Ribosome structural constituent of ribosome | details |
| CFinderADM001985 | hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc N-glycan processing regulation of stomatal movement protein import into chloroplast stroma Notch signaling pathway Golgi-associated vesicle mitochondrial inner membrane presequence translocase complex integral component of mitochondrial inner membrane protein import into mitochondrial matrix actin filament organization mannosyl-oligosaccharide 1,2-alpha-mannosidase activity protein channel activity Necroptosis N-Glycan biosynthesis nucleosome actin binding protein heterodimerization activity Golgi membrane calcium ion binding endoplasmic reticulum | details |
Expression profiles
 Show details about module gene expression profiling |