CFinderADM001508's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Protein_kinases_phosphatases, PPC:1.1.1: Leucine-rich transmembrane protein kinase/Strubbelig Receptor Family 1 | 2.36E-05 | kinase family |
| adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 | 0.006794175 | cazy family |
| Golgi apparatus | 0.016352379 | GO:0005794 |
| protein kinase activity | 0.01809342 | GO:0004672 |
| protein phosphorylation | 0.027719169 | GO:0006468 |
| integral component of membrane | 0.044115156 | GO:0016021 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T001236 | AT3G01450 (4.00E-92) | ARM repeat superfamily protein |
| CRO_T003186 | - | - |
| CRO_T007410 | AT1G21580 (4.00E-09) | Zinc finger C-x8-C-x5-C-x3-H type family protein |
| CRO_T009462 | AT4G22130 (0) | SRF8|STRUBBELIG-receptor family 8 |
| CRO_T023555 | AT1G72480 (0) | Lung seven transmembrane receptor family protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM001120 | Protein_kinases_phosphatases, PPC:1.1.1: Leucine-rich transmembrane protein kinase/Strubbelig Receptor Family 1 integral component of membrane polysaccharide binding adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 protein kinase activity | details |
| CFinderADM001347 | small GTPase mediated signal transduction GTP binding intracellular | details |
| CFinderADM001370 | farnesyl diphosphate biosynthetic process Z-farnesyl diphosphate synthase activity geranyltranstransferase activity dimethylallyltranstransferase activity trans, trans-farnesyl diphosphate biosynthesis geranylgeranyl diphosphate biosynthesis polyisoprenoid biosynthesis superpathway of geranylgeranyl diphosphate biosynthesis II (via MEP) superpathway of geranylgeranyldiphosphate biosynthesis I (via mevalonate) Terpenoid backbone biosynthesis intracellular organelle cytoplasm serine-type endopeptidase activity proteolysis Golgi apparatus nucleic acid binding | details |
| CFinderADM001371 | farnesyl diphosphate biosynthetic process Z-farnesyl diphosphate synthase activity geranyltranstransferase activity dimethylallyltranstransferase activity trans, trans-farnesyl diphosphate biosynthesis geranylgeranyl diphosphate biosynthesis polyisoprenoid biosynthesis superpathway of geranylgeranyl diphosphate biosynthesis II (via MEP) superpathway of geranylgeranyldiphosphate biosynthesis I (via mevalonate) Terpenoid backbone biosynthesis Golgi apparatus | details |
| CFinderADM001544 | Protein_kinases_phosphatases, PPC:1.1.1: Leucine-rich transmembrane protein kinase/Strubbelig Receptor Family 1 Cell cycle formation of glycosidic bonds, GlycosylTransferases: GTnc microtubule-based movement microtubule integral component of membrane Transcription_related, Transcription factor: MYB microtubule motor activity microtubule binding adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 ATP binding protein kinase activity transcription factor activity, sequence-specific DNA binding protein phosphorylation regulation of transcription, DNA-templated | details |
| CFinderADM001615 | microtubule response to radiation condensed chromosome Protein_kinases_phosphatases, PPC:1.1.1: Leucine-rich transmembrane protein kinase/Strubbelig Receptor Family 1 Transcription_related, Transcription regulator: DDT Cell cycle - yeast Nucleotide excision repair Phagosome mitotic chromosome condensation Cell cycle - Caulobacter adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 CDP-diacylglycerol biosynthesis I proteolysis cellulose catabolic process microtubule-based process diacylglycerol and triacylglycerol biosynthesis hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc damaged DNA binding structural constituent of cytoskeleton endonuclease activity ATP-dependent peptidase activity cellulase activity Glycerolipid metabolism protein catabolic process mitochondrial matrix kinesin complex microtubule-based movement nucleic acid phosphodiester bond hydrolysis microtubule motor activity DNA repair ATPase activity microtubule binding unfolded protein binding ATP binding cytoplasm protein folding serine-type endopeptidase activity GTPase activity | details |
| CFinderADM002010 | organ boundary specification between lateral organs and the meristem ATP-dependent chromatin remodeling regulation of gene expression, epigenetic MAPK signaling pathway - yeast cytoplasmic microtubule organization DNA-dependent ATPase activity protein domain specific binding microtubule-severing ATPase activity Transcription_related, Transcription regulator: SNF2 chromatin binding response to stimulus nucleus ATP binding regulation of transcription, DNA-templated cytosol | details |
Expression profiles
 Show details about module gene expression profiling |