CFinderADM001512's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| strigolactone biosynthetic process | 3.55E-05 | GO:1901601 |
| Cytochrome_P450, Cytochrome P450: CYP81D | 4.99E-05 | CYP450 family |
| secondary shoot formation | 6.21E-05 | GO:0010223 |
| 1,4-dihydroxy-2-naphthoate biosynthesis II (plants) | 0.000138618 | plantCyc |
| indole glucosinolate metabolic process | 0.00022549 | GO:0042343 |
| defense response to other organism | 0.00022549 | GO:0098542 |
| hydrolase activity | 0.000258673 | GO:0016787 |
| Ubiquinone and other terpenoid-quinone biosynthesis | 0.000297932 | KEGG pathway |
| sesamin biosynthesis | 0.00032609 | plantCyc |
| secondary metabolite biosynthetic process | 0.003851275 | GO:0044550 |
| small-subunit processome | 0.005832593 | GO:0032040 |
| ligase activity | 0.006919206 | GO:0016874 |
| oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | 0.006919206 | GO:0016709 |
| nucleolus | 0.011798421 | GO:0005730 |
| metabolic process | 0.023476923 | GO:0008152 |
| RNA binding | 0.033579665 | GO:0003723 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T006128 | AT4G02920 (6.00E-41) | unknown protein |
| CRO_T006636 | AT1G30520 (4.00E-158) | AAE14|acyl-activating enzyme 14 |
| CRO_T006846 | AT3G07440 (9.00E-78) | unknown protein |
| CRO_T012554 | AT4G37470 (1.00E-82) | KAI2|KARRIKIN INSENSITIVE 2 |
| CRO_T013598 | AT3G23700 (4.00E-24) | Nucleic acid-binding proteins superfamily |
| CRO_T016478 | AT5G19630 (2.00E-79) | alpha/beta-Hydrolases superfamily protein |
| CRO_T031282 | AT4G37320 (4.00E-107) | CYP81D5|cytochrome P450, family 81, subfamily D, polypeptide 5 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM000900 | TFIIK complex Transcription_related, Transcription factor: Alfin-like FAD diphosphatase activity flavin-containing compound metabolic process Cytochrome_P450, Cytochrome P450: CYP81D Taurine and hypotaurine metabolism positive regulation of phosphorylation of RNA polymerase II C-terminal domain anaerobic respiration positive regulation of cyclin-dependent protein serine/threonine kinase activity peptidyl-cysteine oxidation detection of hypoxia response to abiotic stimulus cyclin-dependent protein kinase holoenzyme complex Indole alkaloid biosynthesis cyclin-dependent protein serine/threonine kinase regulator activity sesamin biosynthesis positive regulation of transcription from RNA polymerase II promoter indole glucosinolate metabolic process defense response to other organism oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen hydrolase activity histone binding Basal transcription factors secondary metabolite biosynthetic process oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen Purine metabolism | details |
| CFinderADM000952 | ATP:ADP antiporter activity polynucleotide adenylyltransferase activity ATP transport ADP transport shoot system development mRNA polyadenylation seed development Calcium signaling pathway root development mRNA surveillance pathway mitochondrial inner membrane integral component of membrane intracellular protein transport endoplasmic reticulum membrane Protein processing in endoplasmic reticulum endoplasmic reticulum RNA binding transmembrane transport structural constituent of ribosome translation | details |
| CFinderADM001346 | (+)-camphor biosynthesis Transcription_related, Transcription factor: C2C2-CO-like 3'-phospho-5'-adenylyl sulfate transmembrane transport 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity Cytochrome_P450, Cytochrome P450: CYP81D integral component of endoplasmic reticulum membrane integral component of Golgi membrane matairesinol biosynthesis indole glucosinolate metabolic process defense response to other organism sesamin biosynthesis carbohydrate transport secondary metabolite biosynthetic process oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen regulation of transcription, DNA-templated oxidoreductase activity | details |
| CFinderADM001597 | clathrin coat of coated pit clathrin coat of trans-Golgi network vesicle clathrin heavy chain binding clathrin-mediated endocytosis acetyl-CoA C-acetyltransferase activity structural molecule activity Transcription_related, Transcription factor: bHLH protein dimerization activity intracellular protein transport RNA transport Carbon metabolism metabolic process | details |
Expression profiles
 Show details about module gene expression profiling |