CFinderADM001583's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| D-myo-inositol-5-phosphate metabolism | 1.06E-05 | plantCyc |
| production of small RNA involved in gene silencing by RNA | 1.38E-05 | GO:0070918 |
| posttranscriptional gene silencing by RNA | 1.73E-05 | GO:0035194 |
| mRNA processing | 0.000132531 | GO:0006397 |
| peptidyl-tyrosine dephosphorylation | 0.000132531 | GO:0035335 |
| Inositol phosphate metabolism | 0.000286676 | KEGG pathway |
| protein tyrosine phosphatase activity | 0.000357812 | GO:0004725 |
| Transcription_related, Transcription factor: HB | 0.000664232 | TF family |
| serine-type endopeptidase activity | 0.003919364 | GO:0004252 |
| proteolysis | 0.010087758 | GO:0006508 |
| cell wall | 0.01203942 | GO:0005618 |
| plasmodesma | 0.01203942 | GO:0009506 |
| RNA binding | 0.016047799 | GO:0003723 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T000277 | AT3G10550 (5.00E-92) | AtMTM1|myotubularin 1 |
| CRO_T016298 | AT5G23080 (2.00E-122) | TGH|TOUGH |
| CRO_T017818 | AT2G13370 (0) | CHR5|chromatin remodeling 5 |
| CRO_T029683 | AT1G30600 (0) | Subtilase family protein |
| CRO_T031437 | AT1G28420 (3.00E-86) | HB-1|homeobox-1; RLT1|RINGLET 1 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM001254 | posttranscriptional gene silencing by RNA organ boundary specification between lateral organs and the meristem regulation of gene expression, epigenetic mRNA catabolic process production of small RNA involved in gene silencing by RNA ATP-dependent chromatin remodeling rRNA catabolic process RNA phosphodiester bond hydrolysis, exonucleolytic mRNA processing 3'-5'-exoribonuclease activity DNA-dependent ATPase activity nuclear exosome (RNase complex) cytoplasmic exosome (RNase complex) proteasome complex endonuclease activity mediator complex Viral carcinogenesis nucleosome rRNA processing Transcription_related, Transcription regulator: SNF2 chromatin binding Proteasome Transcription_related, Transcription factor: HB proteasome-mediated ubiquitin-dependent protein catabolic process RNA degradation vesicle-mediated transport protein heterodimerization activity Plant hormone signal transduction nucleus | details |
| CFinderADM001581 | sulfate activation for sulfonation male gamete generation hydrogen sulfide biosynthetic process adenylylsulfate kinase activity Sulfur metabolism sulfate assimilation serine-type endopeptidase activity ATP binding proteolysis phosphorylation plasmodesma cell wall | details |
| CFinderADM001582 | D-myo-inositol-5-phosphate metabolism peptidyl-tyrosine dephosphorylation protein tyrosine phosphatase activity Inositol phosphate metabolism serine-type endopeptidase activity proteolysis cell wall plasmodesma | details |
| CFinderADM002056 | D-myo-inositol-5-phosphate metabolism pyrimidine ribonucleosides salvage I choline biosynthesis III phosphatidate metabolism, as a signaling molecule Transcription_related, Transcription regulator: PHD phospholipases peptidyl-tyrosine dephosphorylation phosphatidylinositol binding protein tyrosine phosphatase activity Glycerophospholipid metabolism Inositol phosphate metabolism root development response to abscisic acid methyltransferase activity methylation Ubiquitin_Proteasome_system, E3: RING phosphorylation kinase activity catalytic activity | details |
Expression profiles
 Show details about module gene expression profiling |