CFinderADM001654's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Protein_kinases_phosphatases, PPC:1.8.1: Leucine Rich Repeat Kinase I | 3.76E-05 | kinase family |
| Transcription_related, Transcription regulator: PHD | 0.00065761 | TF family |
| response to stress | 0.001570364 | GO:0006950 |
| adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 | 0.019304528 | cazy family |
| oxidoreductase activity | 0.019503272 | GO:0016491 |
| Ubiquitin_Proteasome_system, E3: RING | 0.020516612 | ubs family |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T001054 | AT1G07740 (1.00E-27) | Tetratricopeptide repeat (TPR)-like superfamily protein |
| CRO_T002508 | AT1G67720 (0) | Leucine-rich repeat protein kinase family protein |
| CRO_T005481 | AT3G05670 (7.00E-07) | RING/U-box protein |
| CRO_T010682 | - | - |
| CRO_T015661 | AT3G03270 (0.000000009) | Adenine nucleotide alpha hydrolases-like superfamily protein |
| CRO_T031314 | AT1G34200 (2.00E-111) | Glyceraldehyde-3-phosphate dehydrogenase-like family protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM000711 | Influenza A uroporphyrinogen-III synthase activity UDP-galactose transmembrane transporter activity formamidase activity UDP-glucose transmembrane transporter activity hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides root hair cell development UDP-galactose transmembrane transport production of miRNAs involved in gene silencing by miRNA aging histone H4-K5 acetylation regulation of timing of transition from vegetative to reproductive phase ncRNA processing lateral root development tetrapyrrole biosynthetic process UDP-glucose transport NuA4 histone acetyltransferase complex nuclear pore inner ring nuclear pore organization shoot system development reproductive structure development protein import into nucleus, docking Carbon metabolism Stilbenoid, diarylheptanoid and gingerol biosynthesis structural constituent of nuclear pore myricetin 3'-O-methyltransferase activity 11-O-demethyl-17-O-deacetylvindoline O-methyltransferase activity single organism reproductive process regulation of flower development alkaloid biosynthetic process cytokinins 7-N-glucoside biosynthesis cytokinins 9-N-glucoside biosynthesis aromatic compound biosynthetic process cellular response to oxidative stress sulfate assimilation oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor Transcription_related, Transcription factor: PLATZ quercetin glucoside biosynthesis (Allium) Protein_kinases_phosphatases, PPC:4.2.4: SNF1 Related Protein Kinase (SnRK) Transcription_related, Transcription regulator: PHD Ubiquitin_Proteasome_system, E3: RING syringetin biosynthesis quercetin gentiotetraside biosynthesis phenylpropanoids methylation (ice plant) protein disulfide oxidoreductase activity protein homodimerization activity quercetin 7-O-glucosyltransferase activity quercetin 3-O-glucosyltransferase activity cell redox homeostasis regulation of transcription, DNA-templated flavonoid glucuronidation Transcription_related, Transcription factor: NAC flavonoid biosynthetic process intracellular signal transduction | details |
| CFinderADM000956 | Protein_kinases_phosphatases, PPC:1.7.1: S Domain Kinase (Type 1) adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 Protein_kinases_phosphatases, PPC:1.8.1: Leucine Rich Repeat Kinase I protein serine/threonine kinase activity voltage-gated potassium channel activity regulation of membrane potential plasma membrane potassium ion transmembrane transport integral component of plasma membrane oxidoreductase activity protein phosphorylation | details |
| CFinderADM001079 | benzoyl-β-D-glucopyranose biosynthesis salicylate glucosides biosynthesis IV mature ribosome assembly ribosomal large subunit binding ribosomal large subunit biogenesis ribosome binding response to stress translational initiation flavonoid glucuronidation translation initiation factor activity quercetin 7-O-glucosyltransferase activity quercetin 3-O-glucosyltransferase activity flavonoid biosynthetic process nucleolus formation of glycosidic bonds, GlycosylTransferases: GTnc hydrolase activity oxidoreductase activity | details |
| CFinderADM001222 | Protein_kinases_phosphatases, PPC:1.15.3: Leucine Rich Repeat Kinase IV GTPase activator activity positive regulation of GTPase activity Endocytosis Transcription_related, Transcription factor: ERF kinase activity oxidoreductase activity phosphorylation | details |
| CFinderADM001461 | Fluorobenzoate degradation trehalose-phosphatase activity pentose phosphate pathway (non-oxidative branch) trehalose biosynthetic process ethylene biosynthesis I (plants) flavonoid biosynthesis (in equisetum) flavonol biosynthesis Rubisco shunt syringetin biosynthesis protein processing metalloendopeptidase activity response to stress dephosphorylation embryo development ending in seed dormancy dioxygenase activity Carbon metabolism hydrolase activity | details |
| CFinderADM001765 | hydroxyjasmonate sulfate biosynthesis indole-3-acetate activation I wogonin metabolism hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc Glycosaminoglycan degradation baicalein degradation (hydrogen peroxide detoxification) SCF ubiquitin ligase complex SCF-dependent proteasomal ubiquitin-dependent protein catabolic process hydrolase activity, acting on glycosyl bonds response to stress formation of glycosidic bonds, GlycosylTransferases: GTnc ubiquitin-protein transferase activity Ubiquitin_Proteasome_system, E3 adaptor: F-box carbohydrate metabolic process metabolic process hydrolase activity | details |
| CFinderADM001973 | Pyruvate metabolism response to stress Protein_kinases_phosphatases, PPC:1.12.4: Leucine Rich Repeat Kinase XI & XII Transcription_related, Transcription factor: ERF Ubiquitin_Proteasome_system, E3 adaptor: F-box adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 protein kinase activity protein phosphorylation | details |
| CFinderADM002218 | NuA4 histone acetyltransferase complex regulation of timing of transition from vegetative to reproductive phase histone H4-K5 acetylation regulation of flower development ethylene biosynthesis I (plants) leucodelphinidin biosynthesis pinobanksin biosynthesis Transcription_related, Transcription regulator: PHD Flavonoid biosynthesis flavonoid biosynthesis (in equisetum) response to stress Ubiquitin_Proteasome_system, E3: RING oxidoreductase activity regulation of transcription, DNA-templated | details |
Expression profiles
 Show details about module gene expression profiling |