CFinderADM001690's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| pyrimidine ribonucleosides salvage I | 1.64E-17 | plantCyc |
| kinase activity | 2.97E-06 | GO:0016301 |
| peptidase activity, acting on L-amino acid peptides | 2.97E-06 | GO:0070011 |
| phosphorylation | 4.67E-06 | GO:0016310 |
| Ubiquitin_Proteasome_system, DUB: ULP | 5.89E-05 | ubs family |
| integral component of membrane | 0.001394251 | GO:0016021 |
| vacuolar membrane | 0.002973437 | GO:0005774 |
| ATP binding | 0.003713828 | GO:0005524 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T000902 | AT2G31670 (2.00E-66) | UP3|UP3 |
| CRO_T004677 | AT2G15970 (3.00E-43) | ATCOR413-PM1|COLD-REGULATED413 PLASMA MEMBRANE 1; ATCYP19|CYCLOPHILLIN 19; COR413-PM1|cold regulated 413 plasma membrane 1 |
| CRO_T004764 | AT1G26190 (2.00E-45) | Phosphoribulokinase / Uridine kinase family |
| CRO_T005224 | AT3G06910 (1.00E-07) | ELS1|ESD4-LIKE SUMO PROTEASE 1; ULP1A|UB-like protease 1A |
| CRO_T017293 | AT2G01460 (5.00E-37) | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| CRO_T018767 | AT2G01460 (0.0007) | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM000065 | regulation of calcium or calmodulin-mediated signal transduction in response to host detection of calcium ion peptidase activity, acting on L-amino acid peptides modulation by symbiont of host calcium or calmodulin-mediated signal transduction regulation of photomorphogenesis lipid transporter activity calcium-mediated signaling core promoter sequence-specific DNA binding Ubiquitin_Proteasome_system, DUB: ULP lipid transport transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding Ras signaling pathway transcription from RNA polymerase II promoter Lysosome 2-alkenal reductase [NAD(P)] activity protein binding protein dimerization activity calcium ion binding | details |
| CFinderADM000248 | pyrimidine ribonucleosides salvage I detoxification of reactive carbonyls in chloroplasts Fatty acid metabolism helicase activity Ubiquitin_Proteasome_system, E3 adaptor: F-box ATP binding kinase activity phosphorylation nucleic acid binding oxidoreductase activity | details |
| CFinderADM001148 | Transcription_related, Transcription regulator: Pseudo ARR-B Ferroptosis integral component of membrane ferroxidase activity L-serine transmembrane transporter activity ferric iron binding iron ion transport L-serine transport cellular iron ion homeostasis protein-cysteine S-palmitoyltransferase activity Circadian rhythm - plant regulation of gene expression phosphorelay signal transduction system oxidation-reduction process vacuolar membrane intracellular oxidoreductase activity | details |
| CFinderADM001800 | peptidase activity, acting on L-amino acid peptides Ubiquitin_Proteasome_system, DUB: ULP Transcription_related, Transcription factor: C3H microtubule vacuolar membrane | details |
| CFinderADM001860 | mitochondrial RNA metabolic process pyrimidine ribonucleosides salvage I post-chaperonin tubulin folding pathway tubulin complex assembly beta-tubulin binding microtubule cytoskeleton organization RNA modification positive regulation of GTPase activity GTPase activator activity Plant-pathogen interaction cytosol embryo development ending in seed dormancy microtubule cytoplasmic part formation of glycosidic bonds, GlycosylTransferases: GTnc calcium ion binding kinase activity phosphorylation intracellular membrane-bounded organelle plasmodesma RNA binding | details |
Expression profiles
 Show details about module gene expression profiling |