CFinderADM001724's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| monovalent cation:proton antiporter activity | 1.84E-05 | GO:0005451 |
| regulation of pH | 0.000111705 | GO:0006885 |
| hydrogen ion transmembrane transport | 0.000827899 | GO:1902600 |
| endomembrane system | 0.001348929 | GO:0012505 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T001246 | AT1G12110 (9.00E-68) | ATNRT1|NITRATE TRANSPORTER 1; CHL1|CHLORINA 1; NPF6.3|NRT1/ PTR family 6.3; NRT1.1|nitrate transporter 1.1 |
| CRO_T004390 | AT5G54090 (0) | DNA mismatch repair protein MutS, type 2 |
| CRO_T007321 | - | - |
| CRO_T020782 | AT4G24310 (5.00E-36) | Protein of unknown function (DUF679) |
| CRO_T027591 | AT1G64170 (0) | ATCHX16|cation/H+ exchanger 16 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM002078 | detection of hypoxia peptidyl-cysteine oxidation anaerobic respiration heme biosynthetic process ferrochelatase activity heme biosynthesis I (aerobic) Taurine and hypotaurine metabolism oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen Porphyrin and chlorophyll metabolism Transcription_related, Transcription factor: bHLH protein dimerization activity integral component of membrane | details |
| CFinderADM002289 | clathrin coat of trans-Golgi network vesicle clathrin coat of coated pit 3-dehydroquinate biosynthesis I clathrin heavy chain binding ferrochelatase activity 3-deoxy-7-phosphoheptulonate synthase activity clathrin-mediated endocytosis heme biosynthetic process heme biosynthesis I (aerobic) Transcription_related, Transcription regulator: DDT aromatic amino acid family biosynthetic process structural molecule activity lyase activity Porphyrin and chlorophyll metabolism Transcription_related, Transcription factor: bHLH Biosynthesis of amino acids protein dimerization activity intracellular protein transport | details |
Expression profiles
 Show details about module gene expression profiling |