CFinderADM001778's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| flower development | 1.27E-08 | GO:0009908 |
| auxin-activated signaling pathway | 3.99E-08 | GO:0009734 |
| inorganic anion exchanger activity | 9.82E-06 | GO:0005452 |
| cotyledon morphogenesis | 1.10E-05 | GO:0048826 |
| apical part of cell | 1.48E-05 | GO:0045177 |
| basal plasma membrane | 1.48E-05 | GO:0009925 |
| inflorescence development | 2.75E-05 | GO:0010229 |
| leaf formation | 2.75E-05 | GO:0010338 |
| leaf shaping | 2.75E-05 | GO:0010358 |
| transcription, DNA-templated | 2.85E-05 | GO:0006351 |
| inorganic anion transport | 2.89E-05 | GO:0015698 |
| gravitropism | 4.40E-05 | GO:0009630 |
| response to bacterium | 4.50E-05 | GO:0009617 |
| xylem and phloem pattern formation | 4.50E-05 | GO:0010051 |
| Transcription_related, Transcription factor: ARF | 5.95E-05 | TF family |
| DNA binding | 6.56E-05 | GO:0003677 |
| regulation of intracellular pH | 7.69E-05 | GO:0051453 |
| anion transmembrane transport | 9.37E-05 | GO:0098656 |
| regulation of transcription, DNA-templated | 9.37E-05 | GO:0006355 |
| auxin polar transport | 0.000361352 | GO:0009926 |
| root development | 0.000427392 | GO:0048364 |
| Transcription_related, Transcription factor: MYB | 0.001351594 | TF family |
| nucleus | 0.003704508 | GO:0005634 |
| plant-type cell wall | 0.00371864 | GO:0009505 |
| integral component of plasma membrane | 0.007917268 | GO:0005887 |
| plasmodesma | 0.012881349 | GO:0009506 |
| transmembrane transport | 0.01345851 | GO:0055085 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T010913 | AT1G15460 (0) | ATBOR4|REQUIRES HIGH BORON 4 |
| CRO_T013158 | AT2G38090 (4.00E-65) | Duplicated homeodomain-like superfamily protein |
| CRO_T014231 | AT1G70940 (0) | ATPIN3|ARABIDOPSIS PIN-FORMED 3; PIN3|PIN-FORMED 3 |
| CRO_T014916 | AT1G30330 (2.00E-100) | ARF6|auxin response factor 6 |
| CRO_T022568 | AT4G24180 (2.00E-78) | TLP1|THAUMATIN-LIKE PROTEIN 1 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM000721 | integral component of membrane apical part of cell basal plasma membrane cotyledon morphogenesis leaf shaping inflorescence development leaf formation gravitropism xylem and phloem pattern formation Transcription_related, Transcription factor: bZIP flower development auxin polar transport root development auxin-activated signaling pathway plant-type cell wall plasmodesma sequence-specific DNA binding transcription factor activity, sequence-specific DNA binding transmembrane transport | details |
| CFinderADM000926 | transmembrane transporter activity transmembrane transport inorganic anion exchanger activity nucleoside transmembrane transporter activity inorganic anion transport nucleoside transmembrane transport Transcription_related, Transcription factor: C2C2-Dof regulation of intracellular pH anion transmembrane transport integral component of membrane cell part plasma membrane regulation of cellular process transporter activity serine-type endopeptidase activity integral component of plasma membrane cell wall transport proteolysis | details |
| CFinderADM001397 | apical part of cell basal plasma membrane cotyledon morphogenesis leaf formation inflorescence development leaf shaping gravitropism xylem and phloem pattern formation regulation of transcription, DNA-templated flower development auxin polar transport Transcription_related, Transcription factor: bZIP root development auxin-activated signaling pathway Transcription_related, Transcription factor: MYB plant-type cell wall plasmodesma transmembrane transport transcription, DNA-templated sequence-specific DNA binding transcription factor activity, sequence-specific DNA binding integral component of membrane | details |
| CFinderADM001554 | basal plasma membrane apical part of cell inorganic anion exchanger activity leaf shaping cotyledon morphogenesis leaf formation inflorescence development transmembrane transport inorganic anion transport gravitropism xylem and phloem pattern formation regulation of intracellular pH anion transmembrane transport flower development auxin polar transport transmembrane transporter activity root development cell part auxin-activated signaling pathway Transcription_related, Transcription factor: bHLH regulation of cellular process plant-type cell wall protein dimerization activity integral component of plasma membrane plasmodesma DNA binding | details |
| CFinderADM001854 | O-acetyltransferase activity cell wall organization or biogenesis Transcription_related, Transcription factor: NAC Golgi apparatus alternative oxidase activity transcription, DNA-templated response to bacterium regulation of transcription, DNA-templated DNA binding aerobic respiration III (alternative oxidase pathway) respiratory chain cellular process nucleus | details |
Expression profiles
 Show details about module gene expression profiling |