CFinderADM001864's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Protein_kinases_phosphatases, PPC:1.10.1: Receptor Like Cytoplasmic Kinase VI | 6.86E-05 | kinase family |
| ATP-dependent helicase activity | 0.000204625 | GO:0008026 |
| DNA recombination | 0.00021207 | GO:0006310 |
| ATP binding | 0.006243261 | GO:0005524 |
| adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 | 0.006794175 | cazy family |
| nucleic acid binding | 0.023344137 | GO:0003676 |
| protein phosphorylation | 0.025665897 | GO:0006468 |
| protein serine/threonine kinase activity | 0.026492277 | GO:0004674 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T017257 | AT2G01970 (5.00E-56) | Endomembrane protein 70 protein family |
| CRO_T020455 | AT3G46710 (3.00E-17) | NB-ARC domain-containing disease resistance protein |
| CRO_T020529 | - | - |
| CRO_T024581 | AT3G05140 (1.00E-122) | RBK2|ROP binding protein kinases 2 |
| CRO_T028510 | AT1G24350 (3.00E-49) | Acid phosphatase/vanadium-dependent haloperoxidase-related protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM001797 | xylan biosynthesis cellulose biosynthesis formation of glycosidic bonds, GlycosylTransferases: GTnc DNA recombination ATP-dependent helicase activity dioxygenase activity transferase activity nucleic acid binding | details |
| CFinderADM001940 | cilium Transcription_related, Transcription factor: TUB nucleic acid binding DNA-(apurinic or apyrimidinic site) lyase activity protein localization to cilium hydrolase activity, hydrolyzing N-glycosyl compounds Base excision repair ATP-dependent helicase activity phosphatidylinositol binding DNA recombination DNA repair Ubiquitin_Proteasome_system, E3 adaptor: F-box | details |
| CFinderADM002107 | Ubiquitin_Proteasome_system, E3 adaptor: F-box | details |
| CFinderADM002236 | protein phosphatase type 2A complex protein phosphatase type 2A regulator activity regulation of protein phosphatase type 2A activity signal transduction mRNA surveillance pathway RNA degradation | details |
Expression profiles
 Show details about module gene expression profiling |