CFinderADM001929's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| GTP binding | 7.84E-06 | GO:0005525 |
| regulation of calcium or calmodulin-mediated signal transduction in response to host | 1.91E-05 | GO:0075177 |
| detection of calcium ion | 1.91E-05 | GO:0005513 |
| modulation by symbiont of host calcium or calmodulin-mediated signal transduction | 2.13E-05 | GO:0075133 |
| regulation of photomorphogenesis | 4.46E-05 | GO:0010099 |
| calcium-mediated signaling | 5.74E-05 | GO:0019722 |
| Ras signaling pathway | 0.000180153 | KEGG pathway |
| Protein_kinases_phosphatases, PPC:4.2.1: Calcium Dependent Protein Kinase | 0.000266903 | kinase family |
| Transcription_related, Transcription factor: MYB-related | 0.000266903 | TF family |
| calcium-dependent protein serine/threonine kinase activity | 0.00065599 | GO:0009931 |
| calmodulin-dependent protein kinase activity | 0.00065599 | GO:0004683 |
| plasma membrane | 0.000872099 | GO:0005886 |
| abscisic acid-activated signaling pathway | 0.001132282 | GO:0009738 |
| peptidyl-serine phosphorylation | 0.001132282 | GO:0018105 |
| protein autophosphorylation | 0.001132282 | GO:0046777 |
| small GTPase mediated signal transduction | 0.001598666 | GO:0007264 |
| Endocytosis | 0.001628254 | KEGG pathway |
| calmodulin binding | 0.001973884 | GO:0005516 |
| protein binding | 0.001973884 | GO:0005515 |
| 2-alkenal reductase [NAD(P)] activity | 0.002011464 | GO:0032440 |
| intracellular signal transduction | 0.002520825 | GO:0035556 |
| calcium ion binding | 0.007262567 | GO:0005509 |
| intracellular | 0.027760432 | GO:0005622 |
| nucleotide binding | 0.02910753 | GO:0000166 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T001583 | AT1G07410 (2.00E-105) | ATRAB-A2B|ARABIDOPSIS RAB GTPASE HOMOLOG A2B; ATRABA2B|RAB GTPase homolog A2B |
| CRO_T012082 | AT1G12680 (2.00E-52) | PEPKR2|phosphoenolpyruvate carboxylase-related kinase 2 |
| CRO_T017939 | AT3G53790 (8.00E-10) | TRFL4|TRF-like 4 |
| CRO_T025040 | AT1G56290 (0) | CwfJ-like family protein |
| CRO_T028555 | AT1G05990 (7.00E-25) | RHS1|ROOT HAIR SPECIFIC 1 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM000065 | regulation of calcium or calmodulin-mediated signal transduction in response to host detection of calcium ion peptidase activity, acting on L-amino acid peptides modulation by symbiont of host calcium or calmodulin-mediated signal transduction regulation of photomorphogenesis lipid transporter activity calcium-mediated signaling core promoter sequence-specific DNA binding Ubiquitin_Proteasome_system, DUB: ULP lipid transport transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding Ras signaling pathway transcription from RNA polymerase II promoter Lysosome 2-alkenal reductase [NAD(P)] activity protein binding protein dimerization activity calcium ion binding | details |
| CFinderADM000551 | UV protection detection of calcium ion error-prone translesion synthesis regulation of calcium or calmodulin-mediated signal transduction in response to host modulation by symbiont of host calcium or calmodulin-mediated signal transduction regulation of photomorphogenesis calcium-mediated signaling response to UV-B Fanconi anemia pathway Ras signaling pathway DNA-directed DNA polymerase activity damaged DNA binding Transcription_related, Transcription factor: HB 2-alkenal reductase [NAD(P)] activity protein binding calcium ion binding formation of glycosidic bonds, GlycosylTransferases: GTnc binding cytosol | details |
| CFinderADM001450 | snRNA transcription regulation of calcium or calmodulin-mediated signal transduction in response to host detection of calcium ion regulation of nitric-oxide synthase activity modulation by symbiont of host calcium or calmodulin-mediated signal transduction Transcription_related, Transcription factor: Alfin-like regulation of photomorphogenesis protein tag calcium-mediated signaling protein sumoylation Ras signaling pathway histone binding small GTPase mediated signal transduction zinc ion binding protein binding 2-alkenal reductase [NAD(P)] activity Ubiquitin_Proteasome_system, E3: U-box Endocytosis RNA transport calcium ion binding GTP binding | details |
| CFinderADM001545 | detection of calcium ion regulation of calcium or calmodulin-mediated signal transduction in response to host modulation by symbiont of host calcium or calmodulin-mediated signal transduction Protein_kinases_phosphatases, PPC:1.1.1: Leucine-rich transmembrane protein kinase/Strubbelig Receptor Family 1 phosphopantetheine binding regulation of photomorphogenesis calcium-mediated signaling Ras signaling pathway homogalacturonan degradation fatty acid biosynthetic process protein binding 2-alkenal reductase [NAD(P)] activity adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 calcium ion binding protein kinase activity protein phosphorylation | details |
| CFinderADM001935 | formation of glycosidic bonds, GlycosylTransferases: GTnc detection of calcium ion regulation of calcium or calmodulin-mediated signal transduction in response to host modulation by symbiont of host calcium or calmodulin-mediated signal transduction regulation of photomorphogenesis calcium-mediated signaling regulation of biological process folic acid-containing compound biosynthetic process Ras signaling pathway 2-alkenal reductase [NAD(P)] activity protein binding calcium ion binding cytosol | details |
| CFinderADM002029 | regulation of calcium or calmodulin-mediated signal transduction in response to host detection of calcium ion modulation by symbiont of host calcium or calmodulin-mediated signal transduction regulation of photomorphogenesis calcium-mediated signaling spliceosomal complex assembly Mitophagy - yeast U12-type spliceosomal complex U2-type prespliceosome U2 snRNP Ras signaling pathway catalytic step 2 spliceosome mRNA binding microtubule-severing ATPase activity metalloendopeptidase activity small GTPase mediated signal transduction protein binding 2-alkenal reductase [NAD(P)] activity Endocytosis Spliceosome GTP binding calcium ion binding proteolysis intracellular | details |
Expression profiles
 Show details about module gene expression profiling |