CFinderADM001936's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| oxidative photosynthetic carbon pathway | 1.96E-06 | GO:0009854 |
| formation of glycosidic bonds, GlycosylTransferases: GTnc | 4.76E-06 | cazy family |
| hydroxyphenylpyruvate reductase activity | 6.91E-06 | GO:0047995 |
| rosmarinic acid biosynthesis II | 6.93E-06 | plantCyc |
| rosmarinic acid biosynthesis I | 1.21E-05 | plantCyc |
| glyoxylate reductase (NADP) activity | 1.61E-05 | GO:0030267 |
| hydroxypyruvate reductase activity | 1.61E-05 | GO:0016618 |
| 4-hydroxybenzoate biosynthesis I (eukaryotes) | 5.88E-05 | plantCyc |
| Transcription_related, Transcription factor: bHLH | 0.001073991 | TF family |
| NAD binding | 0.001259545 | GO:0051287 |
| protein dimerization activity | 0.002344031 | GO:0046983 |
| Carbon metabolism | 0.008328376 | KEGG pathway |
| cytosol | 0.037342237 | GO:0005829 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T001946 | AT5G61990 (1.00E-48) | Pentatricopeptide repeat (PPR) superfamily protein |
| CRO_T002375 | AT1G09820 (3.00E-27) | Pentatricopeptide repeat (PPR-like) superfamily protein |
| CRO_T003301 | AT5G54680 (2.00E-71) | bHLH105|basic Helix-Loop-Helix 105; ILR3|iaa-leucine resistant3 |
| CRO_T015509 | AT1G27750 (5.00E-07) | nucleic acid binding |
| CRO_T021333 | AT3G19480 (3.00E-24) | PGDH3|phosphoglycerate dehydrogenase 3 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM000924 | rosmarinic acid biosynthesis II rosmarinic acid biosynthesis I positive regulation of biological process oxidative photosynthetic carbon pathway hydroxyphenylpyruvate reductase activity lipid transporter activity hydroxypyruvate reductase activity glyoxylate reductase (NADP) activity response to far red light red or far-red light signaling pathway 4-hydroxybenzoate biosynthesis I (eukaryotes) formation of glycosidic bonds, GlycosylTransferases: GTnc cysteine-type peptidase activity lipid transport Ubiquitin_Proteasome_system, DUB: ULP poly(A) RNA binding Lysosome ATP-dependent RNA helicase activity NAD binding RNA processing Transcription_related, Transcription factor: FAR1 Spliceosome Carbon metabolism | details |
| CFinderADM001056 | oxidative photosynthetic carbon pathway 'de novo' AMP biosynthetic process adenylosuccinate synthase activity hydroxyphenylpyruvate reductase activity rosmarinic acid biosynthesis II rosmarinic acid biosynthesis I hydroxypyruvate reductase activity glyoxylate reductase (NADP) activity Carbon metabolism 4-hydroxybenzoate biosynthesis I (eukaryotes) pyruvate decarboxylation to acetyl CoA adenosine ribonucleotides de novo biosynthesis NAD binding magnesium ion binding Purine metabolism Spliceosome GTP binding | details |
| CFinderADM001935 | formation of glycosidic bonds, GlycosylTransferases: GTnc detection of calcium ion regulation of calcium or calmodulin-mediated signal transduction in response to host modulation by symbiont of host calcium or calmodulin-mediated signal transduction regulation of photomorphogenesis calcium-mediated signaling regulation of biological process folic acid-containing compound biosynthetic process Ras signaling pathway 2-alkenal reductase [NAD(P)] activity protein binding calcium ion binding cytosol | details |
| CFinderADM002300 | pyridoxal phosphate binding L-cystine L-cysteine-lyase (deaminating) cystathionine gamma-lyase activity hydroxyphenylpyruvate reductase activity oxidative photosynthetic carbon pathway Carbon metabolism L-cysteine desulfhydrase activity 'de novo' L-methionine biosynthetic process cystathionine beta-lyase activity hydroxypyruvate reductase activity glyoxylate reductase (NADP) activity rosmarinic acid biosynthesis II rosmarinic acid biosynthesis I L-aspartate:2-oxoglutarate aminotransferase activity seleno-amino acid biosynthesis L-phenylalanine:2-oxoglutarate aminotransferase activity S-methyl-5-thio-α-D-ribose 1-phosphate degradation pyruvate decarboxylation to acetyl CoA 4-hydroxybenzoate biosynthesis I (eukaryotes) biosynthetic process NAD binding Biosynthesis of amino acids Ubiquitin_Proteasome_system, E3: RING | details |
Expression profiles
 Show details about module gene expression profiling |