CFinderADM001974's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| chromosome organization | 6.35E-05 | GO:0051276 |
| plant-type vacuole | 0.000105253 | GO:0000325 |
| adenosine ribonucleotides de novo biosynthesis | 0.000131618 | plantCyc |
| DNA metabolic process | 0.000322463 | GO:0006259 |
| helicase activity | 0.002425585 | GO:0004386 |
| ATPase activity, coupled to transmembrane movement of substances | 0.003154097 | GO:0042626 |
| nucleolus | 0.006724807 | GO:0005730 |
| vacuolar membrane | 0.006724807 | GO:0005774 |
| Golgi apparatus | 0.008801353 | GO:0005794 |
| Spliceosome | 0.009056706 | KEGG pathway |
| Oxidative phosphorylation | 0.009648998 | KEGG pathway |
| transmembrane transport | 0.010950366 | GO:0055085 |
| nucleic acid binding | 0.031125516 | GO:0003676 |
| nucleotide binding | 0.032175427 | GO:0000166 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T001956 | AT1G09140 (6.00E-53) | At-SR30|Serine/Arginine-Rich Protein Splicing Factor 30; ATSRP30|SERINE-ARGININE PROTEIN 30 |
| CRO_T012461 | AT1G71490 (5.00E-62) | Tetratricopeptide repeat (TPR)-like superfamily protein |
| CRO_T013299 | - | - |
| CRO_T013595 | AT3G58730 (1.00E-113) | vacuolar ATP synthase subunit D (VATD) / V-ATPase D subunit / vacuolar proton pump D subunit (VATPD) |
| CRO_T017052 | - | - |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM000514 | nucleolus maturation of SSU-rRNA small-subunit processome Ribosome biogenesis in eukaryotes nucleic acid binding Spliceosome nucleotide binding | details |
| CFinderADM001299 | adenosine ribonucleotides de novo biosynthesis vacuolar membrane Oxidative phosphorylation hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances plant-type vacuole ATPase activity, coupled to transmembrane movement of substances Golgi apparatus transport transmembrane transport | details |
| CFinderADM002059 | adenosine ribonucleotides de novo biosynthesis ATPase activity, coupled to transmembrane movement of substances chorismate synthase activity H3 histone acetyltransferase activity regulation of phosphoprotein phosphatase activity histone H3 acetylation protein phosphatase type 1 complex chorismate biosynthesis from 3-dehydroquinate root morphogenesis chorismate biosynthetic process histone acetyltransferase complex transmembrane transport plant-type vacuole protein phosphatase inhibitor activity Transcription_related, Transcription regulator: GNAT Notch signaling pathway aromatic amino acid family biosynthetic process flower development response to light stimulus cellular amino acid biosynthetic process FMN binding GTPase activator activity ABC transporters pollen development positive regulation of GTPase activity peptidase activity signal transduction embryo development ending in seed dormancy Biosynthesis of amino acids Endocytosis vacuolar membrane nucleolus Golgi apparatus Oxidative phosphorylation proteolysis chloroplast stroma | details |
Expression profiles
 Show details about module gene expression profiling |