CFinderADM001991's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| response to humidity | 7.06E-06 | GO:0009270 |
| organic anion transport | 7.06E-06 | GO:0015711 |
| response to carbon dioxide | 7.06E-06 | GO:0010037 |
| multicellular organismal water homeostasis | 7.06E-06 | GO:0050891 |
| stomatal closure | 1.13E-05 | GO:0090332 |
| cellular ion homeostasis | 1.35E-05 | GO:0006873 |
| response to ozone | 1.35E-05 | GO:0010193 |
| inorganic anion transport | 2.47E-05 | GO:0015698 |
| protein phosphatase binding | 2.55E-05 | GO:0019903 |
| regulation of stomatal opening | 2.93E-05 | GO:1902456 |
| transcription from RNA polymerase III promoter | 4.23E-05 | GO:0006383 |
| reactive oxygen species degradation | 4.44E-05 | plantCyc |
| superoxide radicals degradation | 4.44E-05 | plantCyc |
| anion transmembrane transport | 9.40E-05 | GO:0098656 |
| removal of superoxide radicals | 9.40E-05 | GO:0019430 |
| voltage-gated anion channel activity | 9.55E-05 | GO:0008308 |
| regulation of anion transmembrane transport | 9.83E-05 | GO:1903959 |
| protein kinase binding | 0.000127266 | GO:0019901 |
| superoxide dismutase activity | 0.000127266 | GO:0004784 |
| RNA polymerase III activity | 0.000145015 | GO:0001056 |
| DNA-directed RNA polymerase III complex | 0.000291453 | GO:0005666 |
| Peroxisome | 0.000387701 | KEGG pathway |
| response to abscisic acid | 0.001472541 | GO:0009737 |
| copper ion binding | 0.00342546 | GO:0005507 |
| Purine metabolism | 0.003718562 | KEGG pathway |
| endoplasmic reticulum | 0.013092394 | GO:0005783 |
| integral component of membrane | 0.032625494 | GO:0016021 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T005684 | AT2G04940 (1.00E-78) | scramblase-related |
| CRO_T014668 | AT3G55005 (4.00E-66) | TON1B|tonneau 1b |
| CRO_T016655 | AT1G08830 (3.00E-63) | CSD1|copper/zinc superoxide dismutase 1 |
| CRO_T022553 | AT1G12480 (0) | CDI3|CARBON DIOXIDE INSENSITIVE 3; OZS1|OZONE-SENSITIVE 1; RCD3|RADICAL-INDUCED CELL DEATH 3; SLAC1|SLOW ANION CHANNEL-ASSOCIATED 1 |
| CRO_T024910 | AT3G49000 (3.00E-35) | RNA polymerase III subunit RPC82 family protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM001184 | endoplasmic reticulum negative regulation of cytokinin dehydrogenase activity UDP-N-acetylglucosamine transmembrane transport negative regulation of ER-associated ubiquitin-dependent protein catabolic process regulation of shoot apical meristem development UDP-N-acetylgalactosamine transport solute:cation symporter activity guanine transmembrane transporter activity uracil transmembrane transporter activity adenine transmembrane transporter activity UDP-N-acetylgalactosamine transmembrane transporter activity guanine import across plasma membrane uracil import across plasma membrane adenine import across plasma membrane hypoxanthine transport reactive oxygen species degradation superoxide radicals degradation pollen exine formation superoxide dismutase activity removal of superoxide radicals cation transmembrane transport Peroxisome carbohydrate transport sugar:proton symporter activity proton transport copper ion binding Golgi membrane plasmodesma | details |
| CFinderADM001199 | response to water 1,3-β-D-glucan biosynthesis Transcription_related, Transcription factor: OFP cell wall organization or biogenesis O-acetyltransferase activity response to stress Golgi apparatus nucleic acid binding | details |
| CFinderADM001318 | Insulin resistance multicellular organismal water homeostasis response to carbon dioxide mitotic spindle organization in nucleus organic anion transport response to humidity protein tyrosine phosphatase activator activity protein phosphatase binding stomatal closure response to ozone cellular ion homeostasis inorganic anion transport regulation of stomatal opening positive regulation of catalytic activity voltage-gated anion channel activity regulation of protein phosphatase type 2A activity protein phosphatase type 2A regulator activity protein kinase binding anion transmembrane transport regulation of anion transmembrane transport protein phosphatase type 2A complex protein peptidyl-prolyl isomerization peptidyl-prolyl cis-trans isomerase activity response to abscisic acid | details |
| CFinderADM001367 | ATP-dependent 5'-3' DNA helicase activity phosphatidylinositol N-acetylglucosaminyltransferase activity G-quadruplex DNA unwinding negative regulation of telomere maintenance via telomerase equatorial microtubule organizing center replication fork telomerase inhibitor activity gamma-tubulin small complex gamma-tubulin binding microtubule minus-end binding mitochondrial genome maintenance mitotic spindle assembly centrosome duplication interphase microtubule nucleation by interphase microtubule organizing center negative regulation of telomerase activity meiotic nuclear division cellular response to DNA damage stimulus GPI anchor biosynthetic process Glycosylphosphatidylinositol(GPI)-anchor biosynthesis cytoplasmic microtubule organization pollen germination structural constituent of cytoskeleton pollen tube growth DNA duplex unwinding DNA replication microtubule nucleotide binding mitochondrion | details |
| CFinderADM002206 | gamma-tubulin small complex equatorial microtubule organizing center centrosome duplication interphase microtubule nucleation by interphase microtubule organizing center mitotic spindle assembly meiotic nuclear division gamma-tubulin binding microtubule minus-end binding cell morphogenesis cytoskeleton organization cytoplasmic microtubule organization structural constituent of cytoskeleton actin binding microtubule | details |
Expression profiles
 Show details about module gene expression profiling |