CFinderADM002018's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| SUMO activating enzyme activity | 1.83E-05 | GO:0019948 |
| formation of glycosidic bonds, GlycosylTransferases: GTnc | 1.84E-05 | cazy family |
| SUMO activating enzyme complex | 2.30E-05 | GO:0031510 |
| protein sumoylation | 5.10E-05 | GO:0016925 |
| Ubiquitin mediated proteolysis | 0.001015836 | KEGG pathway |
| transferase activity, transferring glycosyl groups | 0.001265014 | GO:0016757 |
| cell wall organization | 0.002257342 | GO:0071555 |
| Golgi membrane | 0.002370583 | GO:0000139 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T018462 | AT1G70630 (4.00E-17) | RAY1|REDUCED ARABINOSE YARIV 1 |
| CRO_T018819 | AT2G21470 (9.00E-57) | ATSAE2|SUMO-ACTIVATING ENZYME 2; EMB2764|EMBRYO DEFECTIVE 2764 |
| CRO_T021977 | - | - |
| CRO_T027250 | - | - |
| CRO_T031399 | AT4G01990 (7.00E-61) | Tetratricopeptide repeat (TPR)-like superfamily protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM000283 | thiolester hydrolase activity double-stranded RNA binding Cajal body RNA-directed DNA methylation Golgi transport complex intra-Golgi vesicle-mediated transport seed germination RNA splicing extracellular space double-stranded DNA binding cysteine-type endopeptidase activity Lysosome Fatty acid metabolism fatty acid biosynthetic process proteolysis involved in cellular protein catabolic process | details |
| CFinderADM000812 | SUMO activating enzyme complex Cajal body RNA-directed DNA methylation double-stranded RNA binding SUMO activating enzyme activity protein sumoylation seed germination RNA splicing galactosyltransferase activity formation of glycosidic bonds, GlycosylTransferases: GTnc protein glycosylation double-stranded DNA binding Ubiquitin mediated proteolysis Golgi membrane hydrolase activity | details |
| CFinderADM001529 | formation of glycosidic bonds, GlycosylTransferases: GTnc Transcription_related, Transcription regulator: HMG cell differentiation Transcription_related, Transcription factor: GRAS Golgi membrane transferase activity, transferring glycosyl groups cell wall organization Ubiquitin_Proteasome_system, E3 adaptor: F-box sequence-specific DNA binding transcription factor activity, sequence-specific DNA binding transcription, DNA-templated regulation of transcription, DNA-templated | details |
| CFinderADM001816 | Protein_kinases_phosphatases, PPC:4.1.4: MAP2K defense response, incompatible interaction activation of MAPK activity Neuroactive ligand-receptor interaction GPI-anchor transamidase activity MAP kinase kinase activity attachment of GPI anchor to protein GPI-anchor transamidase complex MAP kinase activity Glycosylphosphatidylinositol(GPI)-anchor biosynthesis MAPK cascade MAPK signaling pathway - plant Spliceosome Golgi apparatus | details |
| CFinderADM001888 | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity dihydropteroate synthase activity 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I Folate biosynthesis formation of glycosidic bonds, GlycosylTransferases: GTnc tetrahydrofolate biosynthesis II folic acid-containing compound biosynthetic process transferase activity, transferring glycosyl groups Golgi membrane cell wall organization kinase activity phosphorylation | details |
| CFinderADM001889 | regulation of leaf development Circadian rhythm formation of glycosidic bonds, GlycosylTransferases: GTnc Transcription_related, Transcription factor: TCP transferase activity, transferring glycosyl groups Golgi membrane cell wall organization mitochondrion | details |
| CFinderADM002110 | Protein_kinases_phosphatases, PPC:4.1.4: MAP2K inositol trisphosphate metabolic process defense response, incompatible interaction activation of MAPK activity inositol-1,3,4-trisphosphate 5-kinase activity inositol tetrakisphosphate 1-kinase activity MAP kinase kinase activity inositol-1,3,4-trisphosphate 6-kinase activity GPI-anchor transamidase activity attachment of GPI anchor to protein GPI-anchor transamidase complex lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) MAP kinase activity 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) Glycosylphosphatidylinositol(GPI)-anchor biosynthesis MAPK cascade Inositol phosphate metabolism MAPK signaling pathway - plant magnesium ion binding ATP binding phosphorylation intracellular | details |
Expression profiles
 Show details about module gene expression profiling |