CFinderADM002097's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| cellular transition metal ion homeostasis | 0.000713635 | GO:0046916 |
| metal ion transport | 0.000713635 | GO:0030001 |
| exocytosis | 0.000713635 | GO:0006887 |
| formation of glycosidic bonds, GlycosylTransferases: GTnc | 0.000945886 | cazy family |
| exocyst | 0.00100825 | GO:0000145 |
| cytoplasm | 0.001108748 | GO:0005737 |
| transition metal ion binding | 0.00203936 | GO:0046914 |
| membrane | 0.003823092 | GO:0016020 |
| phosphorylation | 0.019452701 | GO:0016310 |
| protein kinase activity | 0.034293127 | GO:0004672 |
| nucleotide binding | 0.037161931 | GO:0000166 |
| hydrolase activity | 0.037161931 | GO:0016787 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T006015 | AT4G24530 (0) | O-fucosyltransferase family protein |
| CRO_T009450 | AT1G01490 (2.00E-17) | Heavy metal transport/detoxification superfamily protein |
| CRO_T012331 | AT4G32900 (2.00E-36) | Peptidyl-tRNA hydrolase II (PTH2) family protein |
| CRO_T022274 | AT1G07000 (0) | ATEXO70B2|exocyst subunit exo70 family protein B2 |
| CRO_T022572 | AT2G19130 (2.00E-108) | S-locus lectin protein kinase family protein |
| CRO_T027973 | AT4G34940 (0) | ARO1|armadillo repeat only 1 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM000454 | trans-zeatin O-beta-D-glucosyltransferase activity cis-zeatin O-beta-D-glucosyltransferase activity flavonoid metabolic process small GTPase mediated signal transduction protein ubiquitination ubiquitin-protein transferase activity formation of glycosidic bonds, GlycosylTransferases: GTnc GTP binding intracellular hydrolase activity | details |
| CFinderADM000808 | formation of glycosidic bonds, GlycosylTransferases: GTnc galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity system development exon-exon junction complex xylan biosynthesis translational initiation translation initiation factor activity Golgi apparatus hydrolase activity | details |
| CFinderADM000982 | 5-amino-6-(5-phosphoribosylamino)uracil reductase activity diaminohydroxyphosphoribosylaminopyrimidine deaminase activity FAD metabolic process response to high light intensity flavin biosynthesis I (bacteria and plants) Riboflavin metabolism riboflavin biosynthetic process RNA modification chloroplast organization NADP binding chloroplast envelope zinc ion binding | details |
| CFinderADM001380 | Plant-pathogen interaction Transcription_related, Transcription factor: WRKY formation of glycosidic bonds, GlycosylTransferases: GTnc multicellular organism development sequence-specific DNA binding transcription factor activity, sequence-specific DNA binding hydrolase activity regulation of transcription, DNA-templated | details |
| CFinderADM001491 | caffeoyl-CoA O-methyltransferase activity anthocyanin-containing compound metabolic process coumarin biosynthetic process 3-deoxy-7-phosphoheptulonate synthase activity shade avoidance entrainment of circadian clock nuclear body photoperiodism, flowering 3-dehydroquinate biosynthesis I regulation of stomatal movement scopoletin biosynthesis response to cadmium ion aromatic amino acid family biosynthetic process positive regulation of proteasomal ubiquitin-dependent protein catabolic process photomorphogenesis Phenylalanine metabolism lignin biosynthetic process chlorogenic acid biosynthesis I phenylpropanoids methylation (ice plant) suberin monomers biosynthesis lyase activity identical protein binding Phenylpropanoid biosynthesis DNA repair Biosynthesis of amino acids Ubiquitin mediated proteolysis nucleus ubiquitin protein ligase activity protein ubiquitination Ubiquitin_Proteasome_system, E3 adaptor: DWD methylation | details |
| CFinderADM001547 | RNA lariat debranching enzyme activity Transcription_related, Transcription regulator: mTERF protein processing RNA phosphodiester bond hydrolysis, endonucleolytic mRNA splicing, via spliceosome small GTPase mediated signal transduction embryo development ending in seed dormancy protein ubiquitination serine-type endopeptidase activity ubiquitin-protein transferase activity GTP binding hydrolase activity | details |
| CFinderADM001807 | endodeoxyribonuclease activity, producing 5'-phosphomonoesters L-glutamate transmembrane transporter activity L-glutamate import DNA catabolic process L-arginine import L-lysine transmembrane transport L-amino acid transport L-lysine transmembrane transporter activity antiporter activity phosphorylation protein kinase activity integral component of plasma membrane nucleotide binding | details |
| CFinderADM001848 | protein kinase activity Protein_kinases_phosphatases, PPC:1.1.3: Putative protein kinase/Putative receptor-like protein kinase Transcription_related, Transcription regulator: TRAF adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 NF-kappa B signaling pathway Ubiquitin_Proteasome_system, E3 adaptor: BTB Plant hormone signal transduction chloroplast envelope phosphorylation nucleotide binding protein phosphorylation | details |
| CFinderADM001879 | putrescine biosynthesis II Protein_kinases_phosphatases, PPC:1.6.1: Leucine Rich Repeat Kinase IX arginine decarboxylase activity arginine catabolic process cellular protein localization spermidine biosynthetic process Arginine and proline metabolism Insulin signaling pathway 3'-5' exonuclease activity cellular transition metal ion homeostasis ribosome biogenesis metal ion transport exocytosis response to salt stress exocyst transition metal ion binding nucleic acid phosphodiester bond hydrolysis signal transduction GTPase activity GTP binding protein kinase activity nucleic acid binding | details |
| CFinderADM002040 | RNA lariat debranching enzyme activity exocyst mRNA splicing, via spliceosome translational initiation exocytosis RNA phosphodiester bond hydrolysis, endonucleolytic embryo development ending in seed dormancy translation initiation factor activity ubiquitin-protein transferase activity protein ubiquitination hydrolase activity | details |
| CFinderADM002072 | 5'-nucleotidase activity guanosine nucleotides degradation I guanosine nucleotides degradation II pyrimidine salvage pathway adenosine nucleotides degradation I Plant-pathogen interaction Transcription_related, Transcription factor: WRKY formation of glycosidic bonds, GlycosylTransferases: GTnc multicellular organism development dephosphorylation kinase activity sequence-specific DNA binding transcription factor activity, sequence-specific DNA binding phosphorylation regulation of transcription, DNA-templated | details |
| CFinderADM002177 | Protein_kinases_phosphatases, PPC:1.6.1: Leucine Rich Repeat Kinase IX cellular protein localization Fanconi anemia pathway cellular transition metal ion homeostasis response to salt stress metal ion transport transition metal ion binding signal transduction MAPK signaling pathway - plant protein kinase activity protein phosphorylation | details |
| CFinderADM002280 | mevalonate pathway I coenzyme A metabolic process hydroxymethylglutaryl-CoA reductase (NADPH) activity Protein_kinases_phosphatases, PPC:4.2.1: Calcium Dependent Protein Kinase isoprenoid biosynthetic process calcium-dependent protein serine/threonine kinase activity calmodulin-dependent protein kinase activity Terpenoid backbone biosynthesis Plant-pathogen interaction exocyst abscisic acid-activated signaling pathway protein autophosphorylation peptidyl-serine phosphorylation exocytosis NADP binding calmodulin binding intracellular signal transduction protein ubiquitination ubiquitin-protein transferase activity calcium ion binding endoplasmic reticulum membrane | details |
| CFinderADM002291 | transmembrane receptor protein serine/threonine kinase binding cytoplasm nucleus protein ubiquitination magnesium ion binding GTPase activity ubiquitin-protein transferase activity Ubiquitin_Proteasome_system, E3: U-box GTP binding Ubiquitin_Proteasome_system, E3: RING | details |
Expression profiles
 Show details about module gene expression profiling |