CFinderADM002106's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| formation of glycosidic bonds, GlycosylTransferases: GTnc | 2.36E-06 | cazy family |
| beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity | 6.90E-06 | GO:0003830 |
| microtubule plus-end binding | 6.90E-06 | GO:0051010 |
| coenzyme A transmembrane transporter activity | 7.67E-06 | GO:0015228 |
| tRNA export from nucleus | 9.57E-06 | GO:0006409 |
| negative regulation of microtubule depolymerization | 9.57E-06 | GO:0007026 |
| CURI complex | 1.70E-05 | GO:0032545 |
| UTP-C complex | 1.70E-05 | GO:0034456 |
| coenzyme A transmembrane transport | 2.13E-05 | GO:0035349 |
| cortical microtubule organization | 2.39E-05 | GO:0043622 |
| cell cortex | 3.96E-05 | GO:0005938 |
| spindle microtubule | 5.08E-05 | GO:0005876 |
| protein stabilization | 5.74E-05 | GO:0050821 |
| lipase activity | 6.89E-05 | GO:0016298 |
| protein N-linked glycosylation | 8.28E-05 | GO:0006487 |
| mitotic nuclear division | 9.55E-05 | GO:0007067 |
| cell growth | 0.000136053 | GO:0016049 |
| phragmoplast | 0.000192904 | GO:0009524 |
| integral component of membrane | 0.000525921 | GO:0016021 |
| rRNA processing | 0.000606719 | GO:0006364 |
| N-Glycan biosynthesis | 0.000895358 | KEGG pathway |
| Ribosome biogenesis in eukaryotes | 0.00118126 | KEGG pathway |
| small-subunit processome | 0.001370029 | GO:0032040 |
| lipid metabolic process | 0.001893726 | GO:0006629 |
| mitochondrial inner membrane | 0.001939345 | GO:0005743 |
| plasmodesma | 0.009066394 | GO:0009506 |
| structural constituent of ribosome | 0.01381651 | GO:0003735 |
| translation | 0.015422064 | GO:0006412 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T002771 | AT1G18360 (2.00E-98) | alpha/beta-Hydrolases superfamily protein |
| CRO_T003668 | AT1G14560 (4.00E-131) | CoAc1|CoA Carrier 1 |
| CRO_T004430 | AT2G33210 (0) | HSP60-2|heat shock protein 60-2 |
| CRO_T018815 | AT1G12990 (0) | beta-1,4-N-acetylglucosaminyltransferase family protein |
| CRO_T032078 | AT1G63810 (6.00E-87) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM000739 | tRNA export from nucleus Protein_kinases_phosphatases, PPC:4.1.3: MAP2K CURI complex UTP-C complex MAP kinase kinase activity receptor signaling protein serine/threonine kinase activity rRNA processing MAPK cascade small-subunit processome helicase activity protein binding MAPK signaling pathway - plant Ribosome biogenesis in eukaryotes ATP binding nucleic acid binding | details |
| CFinderADM001404 | microtubule plus-end binding beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity phosphatidylserine decarboxylase activity formation of glycosidic bonds, GlycosylTransferases: GTnc negative regulation of microtubule depolymerization phosphatidylethanolamine biosynthesis I cortical microtubule organization phosphatidylinositol dephosphorylation protein N-linked glycosylation protein stabilization phospholipid biosynthetic process mitotic nuclear division spindle microtubule cell cortex cell growth D-myo-inositol (1,4,5)-trisphosphate degradation phragmoplast 3-phosphoinositide biosynthesis Glycerophospholipid metabolism N-Glycan biosynthesis hydrolase activity plasmodesma | details |
| CFinderADM001560 | Transcription_related, Transcription factor: VOZ CURI complex UTP-C complex protein ubiquitination tRNA export from nucleus long-day photoperiodism, flowering positive regulation of long-day photoperiodism, flowering defense response to bacterium, incompatible interaction cold acclimation Protein_kinases_phosphatases, PPC:1.6.1: Leucine Rich Repeat Kinase IX response to heat positive regulation of transcription, DNA-templated response to water deprivation rRNA processing small-subunit processome intracellular part Ribosome biogenesis in eukaryotes Ubiquitin mediated proteolysis ubiquitin protein ligase binding Ubiquitin_Proteasome_system, E3 adaptor: DWD ubiquitin protein ligase activity ubiquitin-protein transferase activity Ubiquitin_Proteasome_system, E3: RING sequence-specific DNA binding protein kinase activity | details |
| CFinderADM002269 | CURI complex UTP-C complex tRNA export from nucleus regulation of circadian rhythm Legionellosis protein lipoylation Transcription_related, Transcription factor: HSF ribonuclease P activity tRNA processing spliceosomal complex vegetative to reproductive phase transition of meristem glutathione transferase activity translation elongation factor activity RNA phosphodiester bond hydrolysis, endonucleolytic translational elongation positive regulation of transcription, DNA-templated glutathione metabolic process rRNA processing mRNA splicing, via spliceosome small-subunit processome Ribosome biogenesis in eukaryotes vacuole nucleolus RNA transport Spliceosome DNA binding | details |
Expression profiles
 Show details about module gene expression profiling |