CFinderADM002116's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Ubiquitin_Proteasome_system, E3 adaptor: DDB1 | 2.42E-05 | ubs family |
| mRNA splicing, via spliceosome | 0.000286676 | GO:0000398 |
| adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 | 0.000542904 | cazy family |
| Spliceosome | 0.003260414 | KEGG pathway |
| formation of glycosidic bonds, GlycosylTransferases: GTnc | 0.008376071 | cazy family |
| RNA binding | 0.008692319 | GO:0003723 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T005991 | AT1G06710 (0) | MTSF1|mitochondrial stability factor 1 |
| CRO_T008101 | AT4G30150 (3.00E-143) | |
| CRO_T018763 | AT3G55200 (2.00E-90) | AtSAP130a|spliceosome-associated protein 130 a |
| CRO_T020856 | AT4G17616 (2.00E-63) | Pentatricopeptide repeat (PPR) superfamily protein |
| CRO_T025048 | AT4G26466 (4.00E-35) | LRE|LORELEI |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM001384 | ubiquinone-6 biosynthetic process maltose metabolic process alpha-1,4-glucosidase activity maltose alpha-glucosidase activity NADH dehydrogenase activity translational elongation translation elongation factor activity N-Glycan biosynthesis carbohydrate binding GTPase activity Spliceosome GTP binding Ribosome | details |
| CFinderADM002210 | mitochondrial genome maintenance DNA recombinase assembly mitotic recombination strand invasion response to ionizing radiation recombinase activity endodeoxyribonuclease activity four-way junction DNA binding DNA-dependent ATPase activity single-stranded DNA binding double-stranded DNA binding GTPase activator activity response to heat pollen development positive regulation of GTPase activity Endocytosis peptidase activity embryo development ending in seed dormancy formation of glycosidic bonds, GlycosylTransferases: GTnc proteolysis oxidoreductase activity | details |
Expression profiles
 Show details about module gene expression profiling |