CFinderADM002152's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| DNA replication factor A complex | 8.78E-06 | GO:0005662 |
| Prp19 complex | 6.43E-05 | GO:0000974 |
| Cul4-RING E3 ubiquitin ligase complex | 6.43E-05 | GO:0080008 |
| precatalytic spliceosome | 0.000168498 | GO:0071011 |
| mRNA splicing, via spliceosome | 0.000286676 | GO:0000398 |
| catalytic step 2 spliceosome | 0.000307577 | GO:0071013 |
| SNARE interactions in vesicular transport | 0.00048253 | KEGG pathway |
| Spliceosome | 0.004528353 | KEGG pathway |
| Ubiquitin_Proteasome_system, E3 adaptor: DWD | 0.004683771 | ubs family |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T003821 | AT3G55600 (1.00E-79) | Membrane fusion protein Use1 |
| CRO_T016943 | AT2G41500 (1.00E-20) | LIS|LACHESIS |
| CRO_T018911 | AT5G49210 (1.00E-30) | unknown protein |
| CRO_T019814 | AT3G62140 (4.00E-19) | |
| CRO_T028837 | AT1G05960 (2.00E-60) | ARM repeat superfamily protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM000971 | positive regulation of ubiquitin-protein transferase activity cullin family protein binding ubiquitin-like protein binding protein neddylation ubiquitin conjugating enzyme binding ubiquitin ligase complex Glycerophospholipid metabolism transferase activity, transferring acyl groups Ubiquitin_Proteasome_system, E3 adaptor: F-box metabolic process | details |
| CFinderADM001157 | SNARE interactions in vesicular transport Ubiquitin_Proteasome_system, E3: U-box protein ubiquitination ubiquitin-protein transferase activity ligase activity | details |
| CFinderADM001158 | calcium-mediated signaling signal transducer activity Ubiquitin_Proteasome_system, E3: U-box ligase activity ubiquitin-protein transferase activity protein ubiquitination intracellular plasmodesma | details |
| CFinderADM001430 | calcium-mediated signaling signal transducer activity intracellular plasmodesma transferase activity | details |
| CFinderADM002153 | glucan 1,3-alpha-glucosidase activity asparaginase activity DNA replication factor A complex L-asparagine degradation I superpathway of aspartate and asparagine biosynthesis calcium-mediated signaling Cul4-RING E3 ubiquitin ligase complex Prp19 complex signal transducer activity precatalytic spliceosome catalytic step 2 spliceosome unfolded protein binding N-Glycan biosynthesis mRNA splicing, via spliceosome carbohydrate binding protein folding Spliceosome Ubiquitin_Proteasome_system, E3 adaptor: DWD plasmodesma carbohydrate metabolic process intracellular | details |
Expression profiles
 Show details about module gene expression profiling |