CFinderADM002233's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| gamma-glutamyl-peptidase activity | 5.13E-06 | GO:0034722 |
| folate polyglutamylation II | 5.13E-06 | plantCyc |
| glutamate removal from folates | 5.13E-06 | plantCyc |
| Cytochrome_P450, Cytochrome P450: CYP81K | 6.55E-06 | CYP450 family |
| tetrahydrofolylpolyglutamate metabolic process | 8.78E-06 | GO:0046900 |
| Folate biosynthesis | 3.20E-05 | KEGG pathway |
| defense response to other organism | 0.000124792 | GO:0098542 |
| glutamine metabolic process | 0.000124792 | GO:0006541 |
| indole glucosinolate metabolic process | 0.000124792 | GO:0042343 |
| sesamin biosynthesis | 0.000281218 | plantCyc |
| triacylglycerol degradation | 0.001140964 | plantCyc |
| secondary metabolite biosynthetic process | 0.001834266 | GO:0044550 |
| oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | 0.002141985 | GO:0016709 |
| vacuole | 0.002762164 | GO:0005773 |
| Ubiquitin_Proteasome_system, E3 adaptor: F-box | 0.004724179 | ubs family |
| proteolysis | 0.00989567 | GO:0006508 |
| hydrolase activity | 0.022547633 | GO:0016787 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T004491 | AT1G09320 (1.00E-22) | agenet domain-containing protein |
| CRO_T007663 | AT1G78660 (3.00E-29) | ATGGH1|gamma-glutamyl hydrolase 1 |
| CRO_T025684 | - | - |
| CRO_T028313 | AT1G66900 (5.00E-120) | alpha/beta-Hydrolases superfamily protein |
| CRO_T029450 | AT5G10600 (5.00E-119) | CYP81K2|cytochrome P450, family 81, subfamily K, polypeptide 2 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM000821 | regulation of organ formation nitrate import peptide hormone binding iron ion homeostasis xylem and phloem pattern formation NAD+ ADP-ribosyltransferase activity Golgi transport complex integral component of membrane activation of MAPKK activity recognition of pollen MAP kinase kinase kinase activity signal transducer activity MAPK cascade Transcription_related, Transcription factor: C2C2-Dof Protein_kinases_phosphatases, PPC:1.9.2: S Domain Kinase (Type 2) drug transmembrane transport signal transduction defense response drug transmembrane transporter activity Transcription_related, Transcription factor: bHLH Transcription_related, Transcription factor: C2H2 antiporter activity Protein_kinases_phosphatases, PPC:1.12.4: Leucine Rich Repeat Kinase XI & XII 2-alkenal reductase [NAD(P)] activity carbohydrate binding anchored component of plasma membrane transporter activity | details |
| CFinderADM001459 | gamma-glutamyl-peptidase activity folate polyglutamylation II glutamate removal from folates tetrahydrofolylpolyglutamate metabolic process clathrin vesicle coat Cellular senescence Folate biosynthesis glutamine metabolic process vesicle-mediated transport endomembrane system vacuole Ubiquitin_Proteasome_system, E3 adaptor: DWD Ubiquitin_Proteasome_system, E3 adaptor: F-box proteolysis | details |
| CFinderADM001460 | gamma-glutamyl-peptidase activity folate polyglutamylation II glutamate removal from folates cis-zeatin biosynthesis tetrahydrofolylpolyglutamate metabolic process clathrin vesicle coat tRNA dimethylallyltransferase activity AMP dimethylallyltransferase activity Folate biosynthesis glutamine metabolic process cytokinin biosynthetic process tRNA modification Zeatin biosynthesis trans-zeatin biosynthesis triacylglycerol degradation vesicle-mediated transport endomembrane system vacuole Ubiquitin_Proteasome_system, E3 adaptor: F-box proteolysis hydrolase activity | details |
| CFinderADM001594 | Cytochrome_P450, Cytochrome P450: CYP706A folate polyglutamylation II glutamate removal from folates gamma-glutamyl-peptidase activity tetrahydrofolylpolyglutamate metabolic process proteasome regulatory particle assembly Folate biosynthesis Viral carcinogenesis magnesium ion transport glutamine metabolic process magnesium ion transmembrane transport magnesium ion transmembrane transporter activity proteasome regulatory particle, base subcomplex secondary metabolite biosynthetic process oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen vacuole proteolysis iron ion binding heme binding hydrolase activity | details |
| CFinderADM001882 | phosphorylated carbohydrate dephosphorylation sugar-phosphatase activity clathrin vesicle coat hydrolase activity starch binding protein tyrosine/serine/threonine phosphatase activity starch catabolic process starch degradation II triacylglycerol degradation vesicle-mediated transport protein dephosphorylation endomembrane system | details |
| CFinderADM001914 | phosphorylated carbohydrate dephosphorylation sugar-phosphatase activity clathrin vesicle coat starch catabolic process protein tyrosine/serine/threonine phosphatase activity starch binding starch degradation II triacylglycerol degradation vesicle-mediated transport protein dephosphorylation endomembrane system hydrolase activity | details |
| CFinderADM001994 | aspartate kinase activity L-homoserine biosynthesis L-lysine biosynthesis VI 2-Oxocarboxylic acid metabolism cellular amino acid biosynthetic process amino acid binding Ubiquitin_Proteasome_system, E3 adaptor: F-box phosphorylation | details |
| CFinderADM002107 | Ubiquitin_Proteasome_system, E3 adaptor: F-box | details |
Expression profiles
 Show details about module gene expression profiling |