TissueCFM000009's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| manganese:proton antiporter activity | 0.001063908 | GO:0010486 |
| response to manganese ion | 0.003218323 | GO:0010042 |
| response to copper ion | 0.003218323 | GO:0046688 |
| regulation of sequestering of zinc ion | 0.004824988 | GO:0061088 |
| response to zinc ion | 0.004824988 | GO:0010043 |
| manganese ion transmembrane transport | 0.004824988 | GO:0071421 |
| cellular manganese ion homeostasis | 0.004824988 | GO:0030026 |
| late endosome | 0.005849767 | GO:0005770 |
| zinc ion transmembrane transporter activity | 0.006107988 | GO:0005385 |
| zinc II ion transmembrane transport | 0.010558094 | GO:0071577 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T009165 | - | - |
| CRO_T015149 | - | - |
| CRO_T015441 | AT2G39450 (2.00E-168) | ATMTP11; MTP11|Cation efflux family protein |
| CRO_T024471 | - | - |
| CRO_T028741 | - | - |
| CRO_T030208 | - | - |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM000027 | manganese:proton antiporter activity response to manganese ion response to copper ion cellular manganese ion homeostasis regulation of sequestering of zinc ion manganese ion transmembrane transport response to zinc ion late endosome zinc ion transmembrane transporter activity zinc II ion transmembrane transport | details |
| TissueCFM000035 | response to manganese ion response to copper ion phosphorylation of RNA polymerase II C-terminal domain holo TFIIH complex core TFIIH complex clathrin vesicle coat manganese:proton antiporter activity late endosome | details |
| TissueCFM000064 | manganese:proton antiporter activity response to manganese ion response to copper ion regulation of sequestering of zinc ion response to zinc ion manganese ion transmembrane transport cellular manganese ion homeostasis late endosome zinc ion transmembrane transporter activity zinc II ion transmembrane transport | details |
| TissueCFM000065 | iron reduction and absorption L-histidine biosynthesis histidinol dehydrogenase activity manganese:proton antiporter activity | details |
| TissueCFM000070 | Transcription_related, Transcription factor: G2-like | details |
| TissueCFM000096 | phosphatidylinositol-3-phosphate binding phosphatidylinositol-3,5-bisphosphate binding manganese:proton antiporter activity | details |
| TissueCFM000175 | Biosynthesis of amino acids | details |
| TissueCFM000180 | response to manganese ion response to copper ion manganese:proton antiporter activity late endosome response to zinc ion cellular manganese ion homeostasis manganese ion transmembrane transport regulation of sequestering of zinc ion anion transmembrane transport zinc II ion transmembrane transport Transcription_related, Transcription factor: bHLH zinc ion transmembrane transporter activity | details |
| TissueCFM000192 | details | |
| TissueCFM000194 | Transcription_related, Transcription factor: FAR1 aspartic endopeptidase activity, intramembrane cleaving manganese:proton antiporter activity integral component of lumenal side of endoplasmic reticulum membrane integral component of cytoplasmic side of endoplasmic reticulum membrane lysosomal membrane Golgi-associated vesicle membrane late endosome regulation of sequestering of zinc ion response to copper ion response to zinc ion response to far red light manganese ion transmembrane transport membrane protein proteolysis response to manganese ion cellular manganese ion homeostasis positive regulation of circadian rhythm Circadian rhythm Terpenoid backbone biosynthesis red, far-red light phototransduction signal peptide processing pollen germination | details |
| TissueCFM000219 | manganese:proton antiporter activity response to copper ion response to manganese ion manganese ion transmembrane transport response to zinc ion regulation of sequestering of zinc ion cellular manganese ion homeostasis late endosome zinc ion transmembrane transporter activity zinc II ion transmembrane transport | details |
| TissueCFM000385 | manganese:proton antiporter activity response to manganese ion response to copper ion regulation of sequestering of zinc ion response to zinc ion manganese ion transmembrane transport cellular manganese ion homeostasis late endosome zinc ion transmembrane transporter activity zinc II ion transmembrane transport | details |
| TissueCFM000767 | manganese:proton antiporter activity response to manganese ion response to copper ion regulation of sequestering of zinc ion response to zinc ion manganese ion transmembrane transport cellular manganese ion homeostasis late endosome zinc ion transmembrane transporter activity zinc II ion transmembrane transport | details |
| TissueCFM000898 | manganese:proton antiporter activity response to copper ion response to manganese ion Cell cycle manganese ion transmembrane transport cellular manganese ion homeostasis mitotic sister chromatid cohesion response to zinc ion regulation of sequestering of zinc ion late endosome cohesin core heterodimer phenylpropanoid biosynthetic process Transcription_related, Transcription factor: bHLH zinc II ion transmembrane transport guiding stereospecific synthesis activity zinc ion transmembrane transporter activity chromatin binding regulation of catalytic activity DNA repair | details |
Expression profiles
 Show details about module gene expression profiling |