TissueCFM000014's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Transcription_related, Transcription factor: B3 | 0.009010541 | TF family |
| drug transmembrane transport | 0.011998977 | GO:0006855 |
| MAPK signaling pathway - plant | 0.01934999 | KEGG pathway |
| antiporter activity | 0.031548419 | GO:0015297 |
| drug transmembrane transporter activity | 0.031548419 | GO:0015238 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T001658 | AT1G49480 (2.00E-09) | RTV1|related to vernalization1 1 |
| CRO_T003408 | AT2G26070 (6.00E-66) | RTE1|REVERSION-TO-ETHYLENE SENSITIVITY1 |
| CRO_T012270 | AT1G71870 (2.00E-135) | MATE efflux family protein |
| CRO_T022365 | AT5G08430 (2.00E-22) | SWIB/MDM2 domain; Plus-3; GYF |
| CRO_T023277 | AT1G33780 (2.00E-91) | Protein of unknown function (DUF179) |
| CRO_T029229 | AT5G24920 (6.00E-06) | AtGDU5|glutamine dumper 5 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM000039 | clathrin adaptor complex Lysosome intracellular protein transport vesicle-mediated transport | details |
| TissueCFM000125 | Protein_kinases_phosphatases, PPC:1.17.1: Wall Associated Kinase oxalate metabolic process cell surface receptor signaling pathway nutrient reservoir activity manganese ion binding oxalate decarboxylase activity drug transmembrane transport antiporter activity drug transmembrane transporter activity | details |
| TissueCFM000199 | Protein_kinases_phosphatases, PPC:2.1.4: GmPK6/AtMRK1 Family | details |
| TissueCFM000255 | NAD metabolic process NADP biosynthetic process phosphorylation Protein_kinases_phosphatases, PPC:4.3.2: Unknown Function Kinase NAD+ kinase activity NAD/NADH phosphorylation and dephosphorylation RNA metabolic process Nicotinate and nicotinamide metabolism Protein_kinases_phosphatases, PPC:1.3.1: Receptor-like protein kinase formation of glycosidic bonds, GlycosylTransferases: GTnc | details |
| TissueCFM000275 | magnoflorine biosynthesis Lysosome clathrin adaptor complex | details |
| TissueCFM000578 | Lysosome sequence-specific DNA binding transcription factor activity, sequence-specific DNA binding glucan endo-1,3-beta-D-glucosidase activity adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc Transcription_related, Transcription factor: bZIP lipid binding polysaccharide binding | details |
| TissueCFM001051 | cellular process immune system process hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc Transcription_related, Transcription regulator: AUX/IAA calcium ion transmembrane transport Transcription_related, Transcription factor: WRKY calcium-transporting ATPase activity response to stimulus Lysosome Plant-pathogen interaction | details |
| TissueCFM001081 | formation of glycosidic bonds, GlycosylTransferases: GTnc Transcription_related, Transcription regulator: AUX/IAA galactosyltransferase activity Phenylpropanoid biosynthesis Plant hormone signal transduction | details |
Expression profiles
 Show details about module gene expression profiling |