TissueCFM000090's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| pyrazolylalanine synthase activity | 0.002257322 | GO:0050234 |
| arylformamidase activity | 0.002257322 | GO:0004061 |
| beta-pyrazolylalanine synthase activity | 0.002257322 | GO:0047458 |
| L-mimosine synthase activity | 0.002257322 | GO:0050461 |
| L-cysteine biosynthesis I | 0.002303262 | plantCyc |
| tryptophan catabolic process to kynurenine | 0.007710803 | GO:0019441 |
| cysteine synthase activity | 0.009023953 | GO:0004124 |
| Transcription_related, Transcription factor: HB | 0.013227325 | TF family |
| anatomical structure development | 0.014443874 | GO:0048856 |
| single-organism developmental process | 0.014443874 | GO:0044767 |
| cysteine biosynthetic process from serine | 0.014443874 | GO:0006535 |
| cellular amino acid biosynthetic process | 0.020780745 | GO:0008652 |
| regulation of cellular process | 0.037270292 | GO:0050794 |
| drug transmembrane transport | 0.037270292 | GO:0006855 |
| drug transmembrane transporter activity | 0.041727028 | GO:0015238 |
| antiporter activity | 0.041727028 | GO:0015297 |
| Carbon metabolism | 0.047108101 | KEGG pathway |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T008322 | AT4G14880 (1.00E-90) | OASA1|O-acetylserine (thiol) lyase (OAS-TL) isoform A1; OLD3|ONSET OF LEAF DEATH 3 |
| CRO_T016652 | AT1G15960 (0) | NRAMP6|NRAMP metal ion transporter 6 |
| CRO_T022627 | AT5G52450 (7.00E-159) | MATE efflux family protein |
| CRO_T026945 | AT4G35220 (1.00E-35) | Cyclase family protein |
| CRO_T028020 | AT4G21640 (3.00E-153) | Subtilase family protein |
| CRO_T033737 | - | - |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM000994 | pyrazolylalanine synthase activity beta-pyrazolylalanine synthase activity L-mimosine synthase activity UDP-glycosyltransferase activity cysteine synthase activity cytokinin-O-glucosides biosynthesis L-cysteine biosynthesis I phospholipases cysteine biosynthetic process from serine cell morphogenesis cellular amino acid biosynthetic process Inositol phosphate metabolism Zeatin biosynthesis transferase activity, transferring hexosyl groups flavonoid biosynthetic process flavonoid glucuronidation hydrolase activity, acting on ester bonds formation of glycosidic bonds, GlycosylTransferases: GTnc | details |
| TissueCFM001380 | Transcription_related, Transcription factor: BBR-BPC response to oxidative stress glutathione-peroxide redox reactions reactive oxygen species degradation L-valine degradation I methylmalonate-semialdehyde dehydrogenase (acylating) activity glutathione peroxidase activity malonate-semialdehyde dehydrogenase (acetylating) activity regulation of mitotic cell cycle Arachidonic acid metabolism regulation of cyclin-dependent protein serine/threonine kinase activity aldehyde dehydrogenase (NAD) activity Transcription_related, Transcription factor: HB Glutathione metabolism glutathione transferase activity lipid binding | details |
| TissueCFM001654 | adenosine kinase activity carotene 7,8-desaturase activity cAMP-dependent protein kinase activity Carotenoid biosynthesis 9,9'-dicis-carotene:quinone oxidoreductase activity 7,9,9'-tricis-neurosporene:quinone oxidoreductase activity ribokinase activity Protein_kinases_phosphatases, PPC:1.5.1: Wall Associated Kinase-like Kinase Transcription_related, Transcription factor: zf-HD trans-lycopene biosynthesis II (plants) neurosporene biosynthesis chromoplast anatomical structure development carotenoid biosynthetic process 9,9'-di-cis-zeta-carotene desaturation to 7,9,7',9'-tetra-cis-lycopene AMP biosynthetic process single-organism developmental process D-ribose metabolic process carbohydrate phosphorylation cell surface receptor signaling pathway glycolysis I (from glucose 6-phosphate) glycolysis IV (plant cytosol) Transcription_related, Transcription factor: HB polysaccharide binding | details |
| TissueCFM001720 | Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 beta-pyrazolylalanine synthase activity arylformamidase activity L-mimosine synthase activity pyrazolylalanine synthase activity 3-oxo-5-beta-steroid 4-dehydrogenase activity delta4-3-oxosteroid 5beta-reductase activity UDP-glycosyltransferase activity cytokinin-O-glucosides biosynthesis L-cysteine biosynthesis I tryptophan catabolic process to kynurenine 3-beta-hydroxy-delta5-steroid dehydrogenase activity cysteine synthase activity Zeatin biosynthesis cysteine biosynthetic process from serine transferase activity, transferring hexosyl groups coenzyme binding cellular amino acid biosynthetic process | details |
Expression profiles
 Show details about module gene expression profiling |