TissueCFM000098's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| redox enzymes that act in conjunction with CAZymes, Auxiliary Activities: AA7 | 0.008743983 | cazy family |
| lignin biosynthetic process | 0.020414684 | GO:0009809 |
| lignin catabolic process | 0.020414684 | GO:0046274 |
| apoplast | 0.025768456 | GO:0048046 |
| hydroquinone:oxygen oxidoreductase activity | 0.046320331 | GO:0052716 |
| oxidoreductase activity, oxidizing metal ions | 0.046320331 | GO:0016722 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T005214 | AT1G17860 (4.00E-33) | Kunitz family trypsin and protease inhibitor protein |
| CRO_T012137 | - | - |
| CRO_T012159 | - | - |
| CRO_T014542 | - | - |
| CRO_T020177 | - | - |
| CRO_T026737 | - | - |
| CRO_T028714 | AT5G48100 (8.00E-168) | LAC15|LACCASE-LIKE 15; TT10|TRANSPARENT TESTA 10 |
| CRO_T029023 | - | - |
| CRO_T032073 | AT1G06820 (1.00E-15) | CCR2|CAROTENOID AND CHLOROPLAST REGULATION 2; CRTISO|carotenoid isomerase |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM000011 | daphnetin modification | details |
| TissueCFM000071 | UDP-D-apiose biosynthesis (from UDP-D-glucuronate) UDP-D-xylose biosynthesis UDP-sugars interconversion UDP-glucuronate decarboxylase activity | details |
| TissueCFM000072 | details | |
| TissueCFM000907 | ruffle membrane regulation of ruffle assembly amino acid import Transcription_related, Transcription factor: WRKY response to starvation | details |
| TissueCFM001555 | ruffle membrane regulation of ruffle assembly amino acid import regulation of seed germination regulation of shoot system development seed maturation sequence-specific DNA binding Transcription_related, Transcription factor: Trihelix Transcription_related, Transcription factor: WRKY transcription regulatory region DNA binding phosphatidylinositol binding amino acid transmembrane transporter activity amino acid transmembrane transport | details |
Expression profiles
 Show details about module gene expression profiling |