TissueCFM000147's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Phenylpropanoid biosynthesis | 1.43E-06 | KEGG pathway |
| geraniol and geranial biosynthesis | 0.005047221 | plantCyc |
| mannitol degradation II | 0.005047221 | plantCyc |
| oxidation-reduction process | 0.0059329 | GO:0055114 |
| leaf senescence | 0.0059329 | GO:0010150 |
| protein localization to pre-autophagosomal structure | 0.0059329 | GO:0034497 |
| autophagic cell death | 0.0059329 | GO:0048102 |
| protein lipidation | 0.0059329 | GO:0006497 |
| nucleophagy | 0.0059329 | GO:0044804 |
| mitophagy | 0.0059329 | GO:0000422 |
| phosphatidylinositol-3-phosphate binding | 0.006923763 | GO:0032266 |
| geraniol dehydrogenase activity | 0.006923763 | GO:0047924 |
| phosphatidylinositol-3,5-bisphosphate binding | 0.006923763 | GO:0080025 |
| pre-autophagosomal structure membrane | 0.007386615 | GO:0034045 |
| response to starvation | 0.008432726 | GO:0042594 |
| sinapyl alcohol dehydrogenase activity | 0.013492362 | GO:0052747 |
| cinnamyl-alcohol dehydrogenase activity | 0.013492362 | GO:0045551 |
| extrinsic component of membrane | 0.017703006 | GO:0019898 |
| oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | 0.021603213 | GO:0016616 |
| response to water deprivation | 0.02187024 | GO:0009414 |
| zinc ion binding | 0.022369494 | GO:0008270 |
| secondary metabolite biosynthetic process | 0.041823267 | GO:0044550 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T003643 | AT4G37980 (3.00E-74) | CAD7|CINNAMYL-ALCOHOL DEHYDROGENASE 7; ELI3|ELICITOR-ACTIVATED GENE 3; ELI3-1|elicitor-activated gene 3-1 |
| CRO_T014082 | - | - |
| CRO_T022431 | AT4G37970 (2.00E-93) | CAD6|cinnamyl alcohol dehydrogenase 6 |
| CRO_T023875 | AT2G40810 (3.00E-114) | ATATG18C|homolog of yeast autophagy 18C |
| CRO_T031227 | AT3G26300 (2.00E-83) | CYP71B34|cytochrome P450, family 71, subfamily B, polypeptide 34 |
| CRO_T032547 | AT4G37970 (2.00E-59) | CAD6|cinnamyl alcohol dehydrogenase 6 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM000002 | mannan endo-1,4-beta-mannosidase activity Fructose and mannose metabolism hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc S-methyltransferase activity mannan catabolic process Transcription_related, Transcription factor: zf-HD | details |
| TissueCFM000036 | details | |
| TissueCFM000096 | phosphatidylinositol-3-phosphate binding phosphatidylinositol-3,5-bisphosphate binding manganese:proton antiporter activity | details |
| TissueCFM000107 | phosphatidylinositol-3,5-bisphosphate binding phosphatidylinositol-3-phosphate binding protein localization to pre-autophagosomal structure leaf senescence nucleophagy autophagic cell death protein lipidation mitophagy pre-autophagosomal structure membrane clathrin vesicle coat response to starvation | details |
| TissueCFM000148 | Phenylpropanoid biosynthesis oxidation-reduction process geraniol and geranial biosynthesis mannitol degradation II 17-O-deacetylvindoline O-acetyltransferase activity geraniol dehydrogenase activity sinapyl alcohol dehydrogenase activity cinnamyl-alcohol dehydrogenase activity secondary metabolite biosynthetic process oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor zinc ion binding Ubiquitin_Proteasome_system, E3 adaptor: F-box | details |
| TissueCFM000163 | Cytochrome_P450, Cytochrome P450: CYP81K | details |
| TissueCFM000672 | Diterpenoid biosynthesis ent-kaurene biosynthesis I phosphatidylinositol-3-phosphate binding phosphatidylinositol-3,5-bisphosphate binding adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc leaf senescence autophagic cell death protein lipidation nucleophagy protein localization to pre-autophagosomal structure mitophagy | details |
Expression profiles
 Show details about module gene expression profiling |