TissueCFM000193's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Transcription_related, Transcription factor: Alfin-like | 0.001329237 | TF family |
| histone binding | 0.030647365 | GO:0042393 |
| RNA transport | 0.03997025 | KEGG pathway |
| translational initiation | 0.040454176 | GO:0006413 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T001486 | AT1G12210 (1.00E-20) | RFL1|RPS5-like 1 |
| CRO_T001835 | - | - |
| CRO_T004179 | AT5G20920 (2.00E-67) | EIF2 BETA|eukaryotic translation initiation factor 2 beta subunit; EMB1401|embryo defective 1401 |
| CRO_T005456 | - | - |
| CRO_T016906 | AT5G20510 (6.00E-88) | AL5|alfin-like 5 |
| CRO_T017470 | - | - |
| CRO_T017797 | - | - |
| CRO_T022194 | - | - |
| CRO_T033657 | - | - |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM000004 | details | |
| TissueCFM000005 | geraniol kinase activity CTP:2-trans,-6-trans-farnesol kinase activity geranylgeraniol kinase activity anthranilate synthase complex farnesylcysteine salvage pathway L-tryptophan biosynthesis anthranilate synthase activity | details |
| TissueCFM000017 | Transcription_related, Transcription factor: Alfin-like histone binding unfolded protein binding | details |
| TissueCFM000029 | details | |
| TissueCFM000036 | details | |
| TissueCFM000040 | Transcription_related, Transcription factor: Alfin-like | details |
| TissueCFM000109 | details | |
| TissueCFM000143 | adenine and adenosine salvage II | details |
| TissueCFM000182 | Transcription_related, Transcription factor: Alfin-like Aminoacyl-tRNA biosynthesis | details |
| TissueCFM000206 | Transcription_related, Transcription factor: Alfin-like formation of glycosidic bonds, GlycosylTransferases: GTnc histone binding | details |
| TissueCFM000218 | Transcription_related, Transcription factor: Alfin-like PI3K-Akt signaling pathway histone binding | details |
| TissueCFM000270 | farnesylcysteine salvage pathway | details |
| TissueCFM000318 | Transcription_related, Transcription factor: Alfin-like histone binding | details |
| TissueCFM000319 | Protein_kinases_phosphatases, PPC:4.2.2: Phosphoenolpyruvate Carboxylase Kinase Transcription_related, Transcription factor: Alfin-like calcium-dependent protein serine/threonine kinase activity histone binding calmodulin-dependent protein kinase activity peptidyl-serine phosphorylation protein autophosphorylation abscisic acid-activated signaling pathway calmodulin binding intracellular signal transduction | details |
| TissueCFM000337 | Transcription_related, Transcription factor: Alfin-like Phenylpropanoid biosynthesis oxidoreductase activity histone binding | details |
| TissueCFM000342 | Transcription_related, Transcription factor: Alfin-like | details |
| TissueCFM000517 | Transcription_related, Transcription factor: Alfin-like histone binding | details |
| TissueCFM000552 | Transcription_related, Transcription factor: Alfin-like Regulation of actin cytoskeleton cellular component organization histone binding single-organism cellular process | details |
| TissueCFM000584 | Transcription_related, Transcription factor: Alfin-like photosystem II reaction center histone binding photosynthesis, light reaction | details |
| TissueCFM000585 | Transcription_related, Transcription factor: Alfin-like photosystem II reaction center histone binding photosynthesis, light reaction | details |
| TissueCFM000602 | Protein_kinases_phosphatases, PPC:4.2.2: Phosphoenolpyruvate Carboxylase Kinase Transcription_related, Transcription factor: Alfin-like calcium-dependent protein serine/threonine kinase activity histone binding calmodulin-dependent protein kinase activity peptidyl-serine phosphorylation protein autophosphorylation abscisic acid-activated signaling pathway calmodulin binding intracellular signal transduction | details |
| TissueCFM000620 | Transcription_related, Transcription factor: Alfin-like Transcription_related, Transcription factor: PLATZ regulation of embryonic development glycyl-tRNA aminoacylation mitochondrial electron transport, ubiquinol to cytochrome c | details |
| TissueCFM000771 | Transcription_related, Transcription factor: Alfin-like post-embryonic root development MAPK signaling pathway - yeast PI3K-Akt signaling pathway Transcription_related, Transcription factor: M-type | details |
| TissueCFM001084 | Transcription_related, Transcription factor: Alfin-like histone binding | details |
| TissueCFM001277 | Transcription_related, Transcription factor: Alfin-like histone binding | details |
Expression profiles
 Show details about module gene expression profiling |