TissueCFM000242's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| response to biotic stimulus | 0.000570382 | GO:0009607 |
| defense response | 0.001263014 | GO:0006952 |
| secondary metabolite biosynthetic process | 0.001263014 | GO:0044550 |
| oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | 0.003881986 | GO:0016709 |
| Cytochrome_P450, Cytochrome P450: CYP83B | 0.004874734 | CYP450 family |
| Nitrogen metabolism | 0.006483246 | KEGG pathway |
| salvigenin biosynthesis | 0.011506787 | plantCyc |
| membrane | 0.017243011 | GO:0016020 |
| Cytochrome_P450, Cytochrome P450: CYP71B | 0.017828927 | CYP450 family |
| vindoline and vinblastine biosynthesis | 0.021582363 | plantCyc |
| terpene synthase activity | 0.032520153 | GO:0010333 |
| Transcription_related, Transcription factor: bHLH | 0.043420289 | TF family |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T001055 | AT1G08090 (0) | ATNRT2.1|NITRATE TRANSPORTER 2.1; ATNRT2:1|nitrate transporter 2:1; LIN1|LATERAL ROOT INITIATION 1; NRT2|NITRATE TRANSPORTER 2 |
| CRO_T002017 | AT1G07430 (1.00E-23) | AIP1|AKT1 interacting protein phosphatase 1; HAI2|highly ABA-induced PP2C gene 2; HON|HONSU (Korean for abnormal drowsiness) |
| CRO_T006603 | AT3G26300 (5.00E-98) | CYP71B34|cytochrome P450, family 71, subfamily B, polypeptide 34 |
| CRO_T013395 | AT1G18590 (1.00E-72) | ATSOT17|SULFOTRANSFERASE 17; ATST5C|ARABIDOPSIS SULFOTRANSFERASE 5C |
| CRO_T021313 | AT3G25830 (5.00E-136) | ATTPS-CIN|terpene synthase-like sequence-1,8-cineole |
| CRO_T022277 | AT2G22770 (6.00E-28) | NAI1|basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
| CRO_T031254 | AT1G35260 (4.00E-19) | MLP165|MLP-like protein 165 |
| CRO_T031361 | AT1G69870 (4.00E-62) | NPF2.13|NRT1/ PTR family 2.13; NRT1.7|nitrate transporter 1.7 |
| CRO_T032455 | AT4G31500 (2.00E-118) | ATR4|ALTERED TRYPTOPHAN REGULATION 4; CYP83B1|cytochrome P450, family 83, subfamily B, polypeptide 1; RED1|RED ELONGATED 1; RNT1|RUNT 1; SUR2|SUPERROOT 2 |
| CRO_T033026 | AT1G35260 (1.00E-20) | MLP165|MLP-like protein 165 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM000159 | Cytochrome_P450, Cytochrome P450: CYP83B 4-hydroxy-tetrahydrodipicolinate synthase L-lysine biosynthesis VI salvigenin biosynthesis diaminopimelate biosynthetic process lysine biosynthetic process via diaminopimelate | details |
| TissueCFM000334 | Transcription_related, Transcription factor: NF-YC ajmaline and sarpagine biosynthesis Starch and sucrose metabolism | details |
| TissueCFM000345 | Transcription_related, Transcription factor: OFP Stilbenoid, diarylheptanoid and gingerol biosynthesis benzoate biosynthesis I (CoA-dependent, β-oxidative) D-arabinono-1,4-lactone oxidase activity hydrolase activity O-methyltransferase activity membrane aromatic compound biosynthetic process | details |
| TissueCFM001161 | sugar transmembrane transporter activity benzoate biosynthesis I (CoA-dependent, β-oxidative) Transcription_related, Transcription factor: bHLH carbohydrate transmembrane transport response to biotic stimulus defense response | details |
| TissueCFM001192 | vindoline and vinblastine biosynthesis Cytochrome_P450, Cytochrome P450: CYP71B Transcription_related, Transcription factor: OFP ribosomal large subunit biogenesis Ubiquitin_Proteasome_system, E3: U-box secondary metabolite biosynthetic process protein ubiquitination | details |
Expression profiles
 Show details about module gene expression profiling |