TissueCFM001192's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| vindoline and vinblastine biosynthesis | 0.008658466 | plantCyc |
| Cytochrome_P450, Cytochrome P450: CYP71B | 0.010711901 | CYP450 family |
| Transcription_related, Transcription factor: OFP | 0.010711901 | TF family |
| ribosomal large subunit biogenesis | 0.016560873 | GO:0042273 |
| Ubiquitin_Proteasome_system, E3: U-box | 0.034835127 | ubs family |
| secondary metabolite biosynthetic process | 0.039267747 | GO:0044550 |
| protein ubiquitination | 0.041544146 | GO:0016567 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T006603 | AT3G26300 (5.00E-98) | CYP71B34|cytochrome P450, family 71, subfamily B, polypeptide 34 |
| CRO_T013395 | AT1G18590 (1.00E-72) | ATSOT17|SULFOTRANSFERASE 17; ATST5C|ARABIDOPSIS SULFOTRANSFERASE 5C |
| CRO_T020737 | AT2G20830 (5.00E-32) | transferases; folic acid binding |
| CRO_T026479 | - | - |
| CRO_T027129 | AT5G19650 (3.00E-20) | OFP8|ovate family protein 8 |
| CRO_T033770 | AT3G52450 (6.00E-48) | PUB22|plant U-box 22 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM000242 | response to biotic stimulus defense response secondary metabolite biosynthetic process oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen Cytochrome_P450, Cytochrome P450: CYP83B Nitrogen metabolism salvigenin biosynthesis membrane Cytochrome_P450, Cytochrome P450: CYP71B vindoline and vinblastine biosynthesis terpene synthase activity Transcription_related, Transcription factor: bHLH | details |
| TissueCFM000776 | Protein_kinases_phosphatases, PPC:1.16.1: Receptor Like Cytoplasmic Kinase II peptide metabolic process Transcription_related, Transcription factor: C2C2-Dof cell wall organization or biogenesis Plant hormone signal transduction metalloendopeptidase activity O-acetyltransferase activity | details |
| TissueCFM001735 | GTPase activity GTP binding peroxisome fission chloroplast fission Ubiquitin mediated proteolysis ribosomal large subunit biogenesis translational elongation protein ubiquitination involved in ubiquitin-dependent protein catabolic process multicellular organism development proteasome-mediated ubiquitin-dependent protein catabolic process identical protein binding translation elongation factor activity zinc ion binding chloroplast outer membrane | details |
Expression profiles
 Show details about module gene expression profiling |