TissueCFM000256's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| nucleocytoplasmic transporter activity | 0.001860602 | GO:0005487 |
| Transcription_related, Transcription factor: OFP | 0.003305685 | TF family |
| nuclear pore | 0.004748974 | GO:0005643 |
| RNA transport | 0.031229248 | KEGG pathway |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T007479 | AT1G50730 (1.00E-160) | unknown protein |
| CRO_T009197 | - | - |
| CRO_T009343 | - | - |
| CRO_T014059 | AT3G52525 (3.00E-22) | ATOFP6|OVATE FAMILY PROTEIN 6 |
| CRO_T014264 | AT1G33410 (4.00E-77) | ATNUP160|ARABIDOPSIS NUCLEOPORIN 160; NUP160|NUCLEOPORIN 160; SAR1|SUPPRESSOR OF AUXIN RESISTANCE1 |
| CRO_T017163 | AT2G40475 (3.00E-07) | ASG8|ALTERED SEED GERMINATION 8 |
| CRO_T024516 | AT3G59300 (5.00E-71) | Pentatricopeptide repeat (PPR) superfamily protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM000734 | Folate biosynthesis Transcription_related, Transcription factor: OFP dihydroneopterin aldolase activity folic acid biosynthetic process tetrahydrofolate biosynthetic process oxidoreductase activity, acting on the CH-CH group of donors nucleoside metabolic process 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I tetrahydrofolate biosynthesis II very long chain fatty acid biosynthesis I very long chain fatty acid biosynthesis II lipid metabolic process | details |
| TissueCFM001065 | polyamine transmembrane transport nucleocytoplasmic transporter activity polyamine transmembrane transporter activity L-amino acid transmembrane transporter activity amino acid transmembrane transport nuclear pore integral component of plasma membrane helicase activity antiporter activity | details |
Expression profiles
 Show details about module gene expression profiling |