TissueCFM000491's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T004946 | - | - |
| CRO_T005024 | ATCG00190 (5.00E-07) | RPOB|RNA polymerase subunit beta |
| CRO_T005033 | - | - |
| CRO_T005299 | - | - |
| CRO_T008084 | - | - |
| CRO_T008505 | AT2G42790 (0) | CSY3|citrate synthase 3 |
| CRO_T011154 | AT5G50200 (1.00E-41) | NRT3.1|NITRATE TRANSPORTER 3.1; WR3|WOUND-RESPONSIVE 3 |
| CRO_T011301 | AT1G80600 (4.00E-34) | TUP5|TUMOR PRONE 5; WIN1|HOPW1-1-interacting 1 |
| CRO_T012612 | AT4G40045 (1.00E-11) | unknown protein |
| CRO_T017216 | - | - |
| CRO_T017839 | AT4G27750 (1.00E-08) | ISI1|IMPAIRED SUCROSE INDUCTION 1 |
| CRO_T018328 | - | - |
| CRO_T018390 | - | - |
| CRO_T019933 | - | - |
| CRO_T022845 | AT4G02480 (0) | AAA-type ATPase family protein |
| CRO_T025641 | - | - |
| CRO_T026717 | AT1G08830 (2.00E-21) | CSD1|copper/zinc superoxide dismutase 1 |
| CRO_T029172 | - | - |
| CRO_T029181 | - | - |
| CRO_T030416 | - | - |
| CRO_T031590 | AT5G48230 (8.00E-41) | AACT2|Acetoacetyl-CoA thiolase 2; EMB1276|EMBRYO DEFECTIVE 1276 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM000003 | biotin-carboxyl carrier protein assembly | details |
| TissueCFM000008 | details | |
| TissueCFM000036 | details | |
| TissueCFM000044 | details | |
| TissueCFM000077 | details | |
| TissueCFM000078 | details | |
| TissueCFM000119 | details | |
| TissueCFM000126 | fatty acid β-oxidation II (peroxisome) Fatty acid metabolism long-chain fatty acid activation oleate biosynthesis I (plants) cutin biosynthesis stearate biosynthesis II (bacteria and plants) sporopollenin precursors biosynthesis phosphatidylcholine acyl editing palmitate biosynthesis II (bacteria and plants) suberin monomers biosynthesis benzoyl-CoA biosynthesis 4-aminobutanoate degradation I 4-aminobutanoate degradation IV tricarboxylic acid cycle enzyme complex alpha-galactosidase activity transferase activity, transferring acyl groups other than amino-acyl groups fumarate hydratase activity | details |
| TissueCFM000216 | ent-kaurene biosynthesis I Diterpenoid biosynthesis terpene synthase activity | details |
| TissueCFM000222 | details | |
| TissueCFM000263 | response to hypoxia ent-kaurene biosynthesis I Taurine and hypotaurine metabolism aerobic respiration I (cytochrome c) aerobic respiration III (alternative oxidase pathway) NAD/NADH phosphorylation and dephosphorylation | details |
| TissueCFM000384 | reactive oxygen species degradation superoxide radicals degradation Peroxisome removal of superoxide radicals superoxide dismutase activity copper ion binding | details |
| TissueCFM000400 | Protein_kinases_phosphatases, PPC:1.17.1: Wall Associated Kinase clathrin vesicle coat | details |
| TissueCFM000649 | reactive oxygen species degradation superoxide radicals degradation Peroxisome polar nucleus fusion removal of superoxide radicals pollen tube development Transcription_related, Transcription factor: M-type superoxide dismutase activity transferase activity, transferring glycosyl groups copper ion binding | details |
| TissueCFM000672 | Diterpenoid biosynthesis ent-kaurene biosynthesis I phosphatidylinositol-3-phosphate binding phosphatidylinositol-3,5-bisphosphate binding adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc leaf senescence autophagic cell death protein lipidation nucleophagy protein localization to pre-autophagosomal structure mitophagy | details |
| TissueCFM001000 | Transcription_related, Transcription factor: B3 | details |
| TissueCFM001202 | ribosome biogenesis Ribosome biogenesis in eukaryotes | details |
Expression profiles
 Show details about module gene expression profiling |