TissueCFM000530's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| transcription initiation from RNA polymerase III promoter | 0.001861592 | GO:0006384 |
| cell wall organization or biogenesis | 0.011753557 | GO:0071554 |
| O-acetyltransferase activity | 0.020417692 | GO:0016413 |
| RNA polymerase III activity | 0.020417692 | GO:0001056 |
| DNA-directed RNA polymerase III complex | 0.020450297 | GO:0005666 |
| Purine metabolism | 0.031027882 | KEGG pathway |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T002911 | AT2G36410 (1.00E-53) | Family of unknown function (DUF662) |
| CRO_T016600 | AT5G20590 (2.00E-173) | TBL5|TRICHOME BIREFRINGENCE-LIKE 5 |
| CRO_T019892 | AT1G19130 (3.00E-09) | |
| CRO_T023707 | - | - |
| CRO_T026871 | - | - |
| CRO_T030090 | AT1G06790 (5.00E-17) | RNA polymerase Rpb7 N-terminal domain-containing protein |
| CRO_T030113 | - | - |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM000286 | cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) Fanconi anemia pathway detoxification of reactive carbonyls in chloroplasts polynucleotide 5'-hydroxyl-kinase activity myosin heavy chain kinase activity Ubiquitin_Proteasome_system, E3 adaptor: DWD | details |
| TissueCFM000322 | DNA catabolic process, endonucleolytic protein phosphorylation Fanconi anemia pathway Glycosylphosphatidylinositol(GPI)-anchor biosynthesis myosin heavy chain kinase activity chromosome Ribosome biogenesis in eukaryotes Ubiquitin_Proteasome_system, E3 adaptor: DWD | details |
| TissueCFM001606 | IMP salvage AMP deaminase activity adenosine nucleotides degradation I integral component of mitochondrial outer membrane protein histidine kinase binding Purine metabolism response to abscisic acid embryo development ending in seed dormancy | details |
| TissueCFM001607 | details |
Expression profiles
 Show details about module gene expression profiling |