TissueCFM000614's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| ribonuclease P activity | 0.005847606 | GO:0004526 |
| protein lipoylation | 0.005849767 | GO:0009249 |
| tRNA processing | 0.008766873 | GO:0008033 |
| RNA phosphodiester bond hydrolysis, endonucleolytic | 0.010056006 | GO:0090502 |
| vacuole | 0.016205157 | GO:0005773 |
| RNA transport | 0.026828752 | KEGG pathway |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T004394 | AT1G04635 (6.00E-56) | EMB1687|EMBRYO DEFECTIVE 1687; POP5|A. thaliana homolog of yeast POP5 |
| CRO_T013790 | AT4G02340 (2.00E-88) | alpha/beta-Hydrolases superfamily protein |
| CRO_T021579 | AT3G12770 (4.00E-78) | MEF22|mitochondrial editing factor 22 |
| CRO_T026630 | AT3G14580 (7.00E-21) | Pentatricopeptide repeat (PPR) superfamily protein |
| CRO_T030944 | AT4G01990 (2.00E-69) | Tetratricopeptide repeat (TPR)-like superfamily protein |
| CRO_T032886 | AT5G56310 (6.00E-98) | Pentatricopeptide repeat (PPR) superfamily protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM001807 | Transcription_related, Transcription factor: HSF positive regulation of primary miRNA processing positive regulation of miRNA metabolic process RNA-directed DNA methylation spliceosomal tri-snRNP complex assembly Cajal body U4/U6 x U5 tri-snRNP complex clathrin adaptor complex seed germination response to cold Lysosome catalytic step 2 spliceosome vesicle-mediated transport | details |
Expression profiles
 Show details about module gene expression profiling |