TissueCFM000762's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| membrane coat | 0.01428908 | GO:0030117 |
| plant-type vacuole membrane | 0.029769234 | GO:0009705 |
| structural molecule activity | 0.035401833 | GO:0005198 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T006556 | AT1G62020 (1.00E-14) | Coatomer, alpha subunit |
| CRO_T006811 | AT1G30270 (4.00E-17) | CIPK23|CBL-interacting protein kinase 23; LKS1|LOW-K+-SENSITIVE 1; PKS17|SOS2-like protein kinase 17; SnRK3.23|SNF1-RELATED PROTEIN KINASE 3.23 |
| CRO_T011731 | - | - |
| CRO_T015056 | - | - |
| CRO_T016011 | - | - |
| CRO_T020438 | - | - |
| CRO_T021398 | AT5G39390 (2.00E-16) | Leucine-rich repeat protein kinase family protein |
| CRO_T025958 | - | - |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM000399 | membrane coat Ribosome biogenesis in eukaryotes structural molecule activity ribosome biogenesis nucleolus vesicle-mediated transport Ubiquitin_Proteasome_system, E3 adaptor: DWD intracellular protein transport GTPase activity | details |
| TissueCFM000560 | exosome (RNase complex) snRNA 3'-end processing rRNA metabolic process nuclear polyadenylation-dependent ncRNA catabolic process nuclear-transcribed mRNA catabolic process, exonucleolytic regulation of meristem structural organization carpel development RNA degradation Transcription_related, Transcription factor: HB sequence-specific DNA binding nucleic acid phosphodiester bond hydrolysis | details |
| TissueCFM000877 | membrane coat Ribosome biogenesis in eukaryotes structural molecule activity ribosome biogenesis nucleolus vesicle-mediated transport Ubiquitin_Proteasome_system, E3 adaptor: DWD intracellular protein transport GTPase activity | details |
| TissueCFM000987 | membrane coat structural molecule activity Transcription_related, Transcription factor: BES1 regulation of cellular process vesicle-mediated transport intracellular protein transport cellular process | details |
Expression profiles
 Show details about module gene expression profiling |