TissueCFM000859's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Glutathione metabolism | 2.70E-05 | KEGG pathway |
| secologanin and strictosidine biosynthesis | 0.009362512 | plantCyc |
| toxin catabolic process | 0.012966867 | GO:0009407 |
| cellular metabolic process | 0.012966867 | GO:0044237 |
| glutathione metabolic process | 0.012966867 | GO:0006749 |
| glutathione transferase activity | 0.022357933 | GO:0004364 |
| lyase activity | 0.022357933 | GO:0016829 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T004352 | AT4G25515 (2.00E-116) | SLK3|SEUSS-like 3 |
| CRO_T006784 | - | - |
| CRO_T009816 | AT3G09270 (1.00E-52) | ATGSTU8|glutathione S-transferase TAU 8 |
| CRO_T024470 | - | - |
| CRO_T027580 | AT1G74590 (4.00E-52) | ATGSTU10|GLUTATHIONE S-TRANSFERASE TAU 10 |
| CRO_T030041 | AT1G74020 (5.00E-46) | SS2|strictosidine synthase 2 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM000010 | Transcription_related, Transcription factor: Orphans spliceosomal complex assembly U12-type spliceosomal complex U2-type prespliceosome U2 snRNP mRNA binding catalytic step 2 spliceosome signal transduction kinase activity | details |
| TissueCFM000057 | 2'-deoxymugineic acid phytosiderophore biosynthesis L-phenylalanine biosynthesis III (cytosolic, plants) ubiquitin-dependent protein catabolic process U12-type spliceosomal complex U2-type prespliceosome U2 snRNP catalytic step 2 spliceosome gibberellin catabolic process chiasma assembly triglyceride lipase activity C-19 gibberellin 2-beta-dioxygenase activity thiol-dependent ubiquitin-specific protease activity protein deubiquitination cellular amino acid metabolic process spliceosomal complex assembly response to light stimulus | details |
| TissueCFM000488 | methylerythritol phosphate pathway I methylerythritol phosphate pathway II hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc Transcription_related, Transcription factor: C2C2-GATA Thiamine metabolism | details |
| TissueCFM000511 | secologanin and strictosidine biosynthesis aspartic-type endopeptidase activity geraniol and geranial biosynthesis signal recognition particle, endoplasmic reticulum targeting sinapyl alcohol dehydrogenase activity signal recognition particle binding 7S RNA binding cinnamyl-alcohol dehydrogenase activity ADP binding | details |
| TissueCFM000759 | Proteasome cytosolic proteasome complex nuclear proteasome complex positive regulation of RNA polymerase II transcriptional preinitiation complex assembly positive regulation of proteasomal protein catabolic process proteasome regulatory particle, base subcomplex TBP-class protein binding proteasome-activating ATPase activity ER-associated ubiquitin-dependent protein catabolic process ubiquitin-dependent protein catabolic process phosphate acquisition positive regulation of circadian rhythm response to far red light Circadian rhythm red, far-red light phototransduction spliceosomal complex assembly U2-type prespliceosome U12-type spliceosomal complex U2 snRNP proteasome complex triglyceride lipase activity protein deubiquitination thiol-dependent ubiquitin-specific protease activity | details |
| TissueCFM000856 | Retinol metabolism phosphate acquisition zinc II ion transmembrane transport | details |
| TissueCFM000860 | mitochondrial pyruvate transport Glutathione metabolism secologanin and strictosidine biosynthesis toxin catabolic process glutathione metabolic process response to stress glutathione transferase activity lyase activity | details |
| TissueCFM001253 | etioplast membrane integral component of chloroplast outer membrane pore complex Cellular senescence FoxO signaling pathway histone arginine methylation peptidyl-arginine methylation, to asymmetrical-dimethyl arginine regulation of ion transmembrane transport voltage-gated cation channel activity porin activity protein-arginine omega-N asymmetric methyltransferase activity histone-arginine N-methyltransferase activity gibberellin biosynthesis I (non C-3, non C-13 hydroxylation) gibberellin biosynthesis III (early C-13 hydroxylation) scopoletin biosynthesis umbelliferone biosynthesis DNA replication DNA metabolic process Ubiquitin_Proteasome_system, E3 adaptor: DWD | details |
Expression profiles
 Show details about module gene expression profiling |