TissueCFM000868's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| response to UV | 0.007701867 | GO:0009411 |
| regulation of phragmoplast microtubule organization | 0.007701867 | GO:2000694 |
| regulation of mitotic spindle organization | 0.007701867 | GO:0060236 |
| positive regulation of cytokinesis | 0.007701867 | GO:0032467 |
| kinetochore microtubule | 0.012161323 | GO:0005828 |
| cell plate assembly | 0.012318617 | GO:0000919 |
| nucleotide-excision repair | 0.012829618 | GO:0006289 |
| vacuolar transport | 0.013193838 | GO:0007034 |
| ATP-dependent DNA helicase activity | 0.013783459 | GO:0004003 |
| embryo sac development | 0.019227372 | GO:0009553 |
| DNA duplex unwinding | 0.020501926 | GO:0032508 |
| response to heat | 0.02151939 | GO:0009408 |
| Transcription_related, Transcription regulator: SNF2 | 0.02843581 | TF family |
| pollen development | 0.028612951 | GO:0009555 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T005165 | AT4G38760 (3.00E-167) | Protein of unknown function (DUF3414) |
| CRO_T005950 | AT1G17080 (3.00E-13) | Ribosomal protein L18ae family |
| CRO_T012771 | AT5G16550 (8.00E-29) | unknown protein |
| CRO_T019558 | AT1G03190 (0) | ATXPD|XERODERMA PIGMENTOSUM GROUP D; UVH6|ULTRAVIOLET HYPERSENSITIVE 6 |
| CRO_T020383 | AT1G73030 (6.00E-90) | CHMP1A|CHARGED MULTIVESICULAR BODY PROTEIN/CHROMATIN MODIFYING PROTEIN1A |
| CRO_T027445 | - | - |
| CRO_T029010 | AT3G48150 (4.00E-20) | APC8|anaphase-promoting complex subunit 8 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM000971 | Ubiquitin_Proteasome_system, E3: U-box Transcription_related, Transcription regulator: mTERF Homologous recombination protein ubiquitination protein folding | details |
| TissueCFM001397 | Transcription_related, Transcription regulator: SWI/SNF-SWI3 formation of glycosidic bonds, GlycosylTransferases: GTnc spermine and spermidine degradation III plant sterol biosynthesis Ubiquitin_Proteasome_system, DUB: USP steroid biosynthetic process histone H3-K4 methylation protein deubiquitination Steroid biosynthesis 3-beta-hydroxy-delta5-steroid dehydrogenase activity thiol-dependent ubiquitinyl hydrolase activity Spliceosome Golgi membrane integral component of membrane oxidation-reduction process cell wall organization | details |
| TissueCFM001547 | response to UV tRNA dihydrouridine synthesis Basal transcription factors nucleotide-excision repair lignin catabolic process response to heat DNA duplex unwinding tRNA dihydrouridine synthase activity ATP-dependent DNA helicase activity hydroquinone:oxygen oxidoreductase activity Transcription_related, Transcription factor: C3H Transcription_related, Transcription regulator: SNF2 Transcription_related, Transcription factor: ERF oxidoreductase activity, oxidizing metal ions oxidation-reduction process | details |
| TissueCFM001548 | response to UV tRNA dihydrouridine synthesis Basal transcription factors nucleotide-excision repair tRNA dihydrouridine synthase activity ATP-dependent DNA helicase activity response to heat DNA duplex unwinding Transcription_related, Transcription factor: C3H Transcription_related, Transcription regulator: SNF2 | details |
Expression profiles
 Show details about module gene expression profiling |