TissueCFM000936's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| salicylate glucosides biosynthesis II | 0.003900421 | plantCyc |
| Porphyrin and chlorophyll metabolism | 0.007777821 | KEGG pathway |
| quercetin glucoside biosynthesis (Allium) | 0.015084009 | plantCyc |
| quercetin gentiotetraside biosynthesis | 0.015228191 | plantCyc |
| protein histidine kinase activity | 0.030829539 | GO:0004673 |
| Transcription_related, Transcription factor: ERF | 0.049664992 | TF family |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T002021 | AT5G25190 (7.00E-18) | ESE3|ethylene and salt inducible 3 |
| CRO_T004869 | AT5G03490 (3.00E-134) | UDP-Glycosyltransferase superfamily protein |
| CRO_T009025 | AT3G14160 (3.00E-84) | 2-oxoglutarate-dependent dioxygenase family protein |
| CRO_T023317 | AT5G59210 (2.00E-47) | myosin heavy chain-related |
| CRO_T029044 | AT5G56590 (7.00E-27) | O-Glycosyl hydrolases family 17 protein |
| CRO_T029968 | AT5G43860 (1.00E-49) | ATCLH2|CHLOROPHYLLASE 2 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM000120 | oxidation-reduction process oxylipin biosynthetic process traumatin and (Z)-3-hexen-1-yl acetate biosynthesis 2-Oxocarboxylic acid metabolism Linoleic acid metabolism fatty acid biosynthetic process glutamate metabolic process Butanoate metabolism Sesquiterpenoid and triterpenoid biosynthesis L-glutamate degradation IV glutamate decarboxylase activity L-tryptophan biosynthesis Cytochrome_P450, Cytochrome P450: CYP74B Cytochrome_P450, Cytochrome P450: CYP79B Cytochrome_P450, Cytochrome P450: CYP94C oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen pyridoxal phosphate binding jasmonic acid biosynthesis Transcription_related, Transcription factor: Tify | details |
| TissueCFM000364 | L-tryptophan biosynthesis Protein_kinases_phosphatases, PPC:1.5.1: Wall Associated Kinase-like Kinase Transcription_related, Transcription factor: Tify volatile benzenoid biosynthesis I (ester formation) regulation of response to stimulus tryptophan biosynthetic process benzoate biosynthesis I (CoA-dependent, β-oxidative) tryptophan synthase activity DNA repair regulation of cellular process Biosynthesis of amino acids Plant hormone signal transduction | details |
| TissueCFM000664 | Cytochrome_P450, Cytochrome P450: CYP714A Transcription_related, Transcription factor: LFY gibberellin biosynthesis III (early C-13 hydroxylation) homogalacturonan degradation hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc localization cutin biosynthetic process cell differentiation trichome morphogenesis flower development | details |
| TissueCFM001204 | 2-oxoglutarate decarboxylation to succinyl-CoA 2-oxoisovalerate decarboxylation to isobutanoyl-CoA glycine cleavage pyruvate decarboxylation to acetyl CoA Transcription_related, Transcription factor: DBP Transcription_related, Transcription factor: GRF | details |
| TissueCFM001239 | phosphate acquisition Protein_kinases_phosphatases, PPC:1.13.3: Leucine Rich Repeat Kinase III tau-protein kinase activity Transcription_related, Transcription factor: FAR1 isomerase activity acid phosphatase activity | details |
Expression profiles
 Show details about module gene expression profiling |