TissueCFM001071's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| intrinsic component of membrane | 0.006894174 | GO:0031224 |
| transmembrane receptor protein serine/threonine kinase binding | 0.008993943 | GO:0070696 |
| diacylglycerol kinase activity | 0.008993943 | GO:0004143 |
| Glycerolipid metabolism | 0.010914226 | KEGG pathway |
| protein kinase C-activating G-protein coupled receptor signaling pathway | 0.012161323 | GO:0007205 |
| phosphatidate metabolism, as a signaling molecule | 0.017336392 | plantCyc |
| benzoate biosynthesis I (CoA-dependent, β-oxidative) | 0.019443033 | plantCyc |
| Transcription_related, Transcription regulator: Jumonji | 0.030985299 | TF family |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T001803 | AT1G78280 (0) | transferases, transferring glycosyl groups |
| CRO_T005219 | AT3G51330 (1.00E-53) | Eukaryotic aspartyl protease family protein |
| CRO_T007590 | AT5G24810 (5.00E-151) | ABC1 family protein |
| CRO_T009893 | AT2G28830 (7.00E-156) | PUB12|PLANT U-BOX 12 |
| CRO_T009955 | AT2G20900 (3.00E-31) | DGK5|diacylglycerol kinase 5 |
| CRO_T010614 | AT3G50100 (6.00E-89) | SDN1|small RNA degrading nuclease 1 |
| CRO_T012553 | AT1G07630 (5.00E-22) | PLL5|pol-like 5 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM000427 | phosphatidate metabolism, as a signaling molecule Glycerolipid metabolism Protein_kinases_phosphatases, PPC:4.2.1: Calcium Dependent Protein Kinase potassium ion import protein kinase C-activating G-protein coupled receptor signaling pathway root hair elongation regulation of stomatal closure diacylglycerol kinase activity inward rectifier potassium channel activity Plant-pathogen interaction regulation of membrane potential calcium-dependent protein serine/threonine kinase activity calmodulin-dependent protein kinase activity response to water deprivation abscisic acid-activated signaling pathway response to salt stress protein autophosphorylation peptidyl-serine phosphorylation identical protein binding | details |
| TissueCFM001042 | chlorophyll a degradation II intrinsic component of membrane ABC transporters Insulin signaling pathway phytol metabolic process diacylglycerol and triacylglycerol biosynthesis exocyst plastoglobule Ubiquitin_Proteasome_system, E3: U-box diacylglycerol O-acyltransferase activity protein catabolic process exocytosis | details |
| TissueCFM001043 | intrinsic component of membrane Protein_kinases_phosphatases, PPC:1.5.3: Receptor Like Cytoplasmic Kinase IV trans-cinnamoyl-CoA biosynthesis phenylpropanoid biosynthesis, initial reactions L-phenylalanine catabolic process cinnamic acid biosynthetic process Phenylalanine metabolism ammonium transmembrane transport ABC transporters NF-kappa B signaling pathway suberin monomers biosynthesis phenylalanine ammonia-lyase activity ammonium transmembrane transporter activity protein catabolic process | details |
| TissueCFM001251 | Lysosome high-affinity potassium ion import Transcription_related, Transcription factor: CAMTA sodium ion transmembrane transporter activity lipid transporter activity lipid transport microtubule cytoskeleton organization sodium ion transmembrane transport cytoskeletal part nuclear periphery microtubule cytoskeleton Protein_kinases_phosphatases, PPC:4.1.1: MAP3K potassium ion transmembrane transporter activity adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII plasma membrane protein dephosphorylation protein serine/threonine phosphatase activity | details |
| TissueCFM001372 | intrinsic component of membrane clathrin-coated vesicle clathrin coat assembly response to chitin plasma membrane 1-phosphatidylinositol binding clathrin binding transcription regulatory region DNA binding protein catabolic process Transcription_related, Transcription factor: C2H2 | details |
| TissueCFM001534 | transmembrane receptor protein serine/threonine kinase binding salicylate glucosides biosynthesis II cellulose biosynthesis xyloglucan biosynthesis quercetin glucoside biosynthesis (Allium) organic phosphonate transport organophosphate ester transport recognition of pollen quercetin gentiotetraside biosynthesis organic phosphonate transmembrane-transporting ATPase activity | details |
| TissueCFM001730 | intrinsic component of membrane Protein_kinases_phosphatases, PPC:1.9.2: S Domain Kinase (Type 2) single-organism developmental process protein catabolic process aspartic-type endopeptidase activity ubiquitin protein ligase binding | details |
| TissueCFM001757 | intrinsic component of membrane Sulfur metabolism 3'(2'),5'-bisphosphate nucleotidase activity cytoplasm D-myo-inositol (1,4,5)-trisphosphate degradation farnesylcysteine salvage pathway geraniol and geranial biosynthesis detoxification of reactive carbonyls in chloroplasts traumatin and (Z)-3-hexen-1-yl acetate biosynthesis cellular transition metal ion homeostasis phosphate-containing compound metabolic process protein catabolic process metal ion transport benzoate biosynthesis I (CoA-dependent, β-oxidative) very long chain fatty acid biosynthesis I very long chain fatty acid biosynthesis II transition metal ion binding aspartic-type endopeptidase activity | details |
Expression profiles
 Show details about module gene expression profiling |