TissueCFM001372's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| intrinsic component of membrane | 0.008096328 | GO:0031224 |
| clathrin-coated vesicle | 0.009105005 | GO:0030136 |
| clathrin coat assembly | 0.011723524 | GO:0048268 |
| response to chitin | 0.011723524 | GO:0010200 |
| plasma membrane | 0.021323186 | GO:0005886 |
| 1-phosphatidylinositol binding | 0.023359069 | GO:0005545 |
| clathrin binding | 0.023359069 | GO:0030276 |
| transcription regulatory region DNA binding | 0.029397741 | GO:0044212 |
| protein catabolic process | 0.032064737 | GO:0030163 |
| Transcription_related, Transcription factor: C2H2 | 0.041260108 | TF family |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T003714 | AT1G06210 (1.00E-34) | ENTH/VHS/GAT family protein |
| CRO_T005219 | AT3G51330 (1.00E-53) | Eukaryotic aspartyl protease family protein |
| CRO_T007669 | AT2G28710 (2.00E-27) | C2H2-type zinc finger family protein |
| CRO_T007850 | AT1G75400 (4.00E-61) | RING/U-box superfamily protein |
| CRO_T016460 | AT5G35200 (4.00E-172) | ENTH/ANTH/VHS superfamily protein |
| CRO_T028857 | AT1G54310 (5.00E-78) | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM001042 | chlorophyll a degradation II intrinsic component of membrane ABC transporters Insulin signaling pathway phytol metabolic process diacylglycerol and triacylglycerol biosynthesis exocyst plastoglobule Ubiquitin_Proteasome_system, E3: U-box diacylglycerol O-acyltransferase activity protein catabolic process exocytosis | details |
| TissueCFM001043 | intrinsic component of membrane Protein_kinases_phosphatases, PPC:1.5.3: Receptor Like Cytoplasmic Kinase IV trans-cinnamoyl-CoA biosynthesis phenylpropanoid biosynthesis, initial reactions L-phenylalanine catabolic process cinnamic acid biosynthetic process Phenylalanine metabolism ammonium transmembrane transport ABC transporters NF-kappa B signaling pathway suberin monomers biosynthesis phenylalanine ammonia-lyase activity ammonium transmembrane transporter activity protein catabolic process | details |
| TissueCFM001056 | coproporphyrinogen oxidase activity porphyrin-containing compound biosynthetic process iron-sulfur cluster binding | details |
| TissueCFM001071 | intrinsic component of membrane transmembrane receptor protein serine/threonine kinase binding diacylglycerol kinase activity Glycerolipid metabolism protein kinase C-activating G-protein coupled receptor signaling pathway phosphatidate metabolism, as a signaling molecule benzoate biosynthesis I (CoA-dependent, β-oxidative) Transcription_related, Transcription regulator: Jumonji | details |
| TissueCFM001503 | phytol metabolic process amino acid import 1-phosphatidylinositol binding 1-phosphatidylinositol 4-kinase activity clathrin binding diacylglycerol O-acyltransferase activity cellular protein modification process clathrin coat assembly chlorophyll a degradation II Endocytosis 3-phosphoinositide biosynthesis D-myo-inositol (1,4,5)-trisphosphate biosynthesis diacylglycerol and triacylglycerol biosynthesis clathrin-coated vesicle amino acid transmembrane transporter activity plastoglobule phosphatidylinositol phosphorylation amino acid transmembrane transport response to salt stress protein autophosphorylation protein transport | details |
| TissueCFM001730 | intrinsic component of membrane Protein_kinases_phosphatases, PPC:1.9.2: S Domain Kinase (Type 2) single-organism developmental process protein catabolic process aspartic-type endopeptidase activity ubiquitin protein ligase binding | details |
| TissueCFM001757 | intrinsic component of membrane Sulfur metabolism 3'(2'),5'-bisphosphate nucleotidase activity cytoplasm D-myo-inositol (1,4,5)-trisphosphate degradation farnesylcysteine salvage pathway geraniol and geranial biosynthesis detoxification of reactive carbonyls in chloroplasts traumatin and (Z)-3-hexen-1-yl acetate biosynthesis cellular transition metal ion homeostasis phosphate-containing compound metabolic process protein catabolic process metal ion transport benzoate biosynthesis I (CoA-dependent, β-oxidative) very long chain fatty acid biosynthesis I very long chain fatty acid biosynthesis II transition metal ion binding aspartic-type endopeptidase activity | details |
Expression profiles
 Show details about module gene expression profiling |