TissueCFM001080's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| hydroxyjasmonate sulfate biosynthesis | 0.001595391 | plantCyc |
| indole-3-acetate activation I | 0.001595391 | plantCyc |
| Protein_kinases_phosphatases, PPC:1.5.2: LRK10 Like Kinase (Type 1) | 0.003722304 | kinase family |
| Protein_kinases_phosphatases, PPC:4.2.1: Calcium Dependent Protein Kinase | 0.007697963 | kinase family |
| mitochondrial pyruvate transport | 0.01038718 | GO:0006850 |
| cell surface receptor signaling pathway | 0.042119158 | GO:0007166 |
| peptidyl-tyrosine phosphorylation | 0.042119158 | GO:0018108 |
| abscisic acid-activated signaling pathway | 0.042119158 | GO:0009738 |
| response to stress | 0.042119158 | GO:0006950 |
| peptidyl-serine phosphorylation | 0.042119158 | GO:0018105 |
| protein autophosphorylation | 0.042119158 | GO:0046777 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T003363 | AT5G04220 (3.00E-17) | SYT3|synaptotagmin 3 |
| CRO_T006885 | AT4G10955 (6.00E-29) | alpha/beta-Hydrolases superfamily protein |
| CRO_T011403 | AT4G22310 (1.00E-42) | Uncharacterised protein family (UPF0041) |
| CRO_T016736 | AT1G51760 (8.00E-171) | IAR3|IAA-ALANINE RESISTANT 3; JR3|JASMONIC ACID RESPONSIVE 3 |
| CRO_T025456 | AT1G25390 (9.00E-68) | Protein kinase superfamily protein |
| CRO_T031453 | AT2G41140 (0) | CRK1|CDPK-related kinase 1 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM000452 | hydroxyjasmonate sulfate biosynthesis indole-3-acetate activation I Transcription_related, Transcription factor: ARF phosphopantetheine binding ADP binding intracellular membrane-bounded organelle quercetin 3-O-glucosyltransferase activity quercetin 7-O-glucosyltransferase activity defense response fatty acid biosynthetic process flavonoid glucuronidation flavonoid biosynthetic process | details |
| TissueCFM000453 | hydroxyjasmonate sulfate biosynthesis indole-3-acetate activation I Hippo signaling pathway formation of glycosidic bonds, GlycosylTransferases: GTnc Transcription_related, Transcription factor: ARF Protein_kinases_phosphatases, PPC:4.2.1: Calcium Dependent Protein Kinase plant-type cell wall biogenesis UDP-L-arabinose metabolic process UDP-arabinopyranose mutase activity Amino sugar and nucleotide sugar metabolism metabolic process | details |
| TissueCFM000511 | secologanin and strictosidine biosynthesis aspartic-type endopeptidase activity geraniol and geranial biosynthesis signal recognition particle, endoplasmic reticulum targeting sinapyl alcohol dehydrogenase activity signal recognition particle binding 7S RNA binding cinnamyl-alcohol dehydrogenase activity ADP binding | details |
| TissueCFM000860 | mitochondrial pyruvate transport Glutathione metabolism secologanin and strictosidine biosynthesis toxin catabolic process glutathione metabolic process response to stress glutathione transferase activity lyase activity | details |
| TissueCFM001060 | protein dimerization activity ABC transporters Transcription_related, Transcription factor: bHLH lipid binding transition metal ion binding response to stress cellular transition metal ion homeostasis metal ion transport | details |
| TissueCFM001079 | hydrolysis of carbohydrate esters, Carbohydrate Esterases: CE8 Base excision repair Protein_kinases_phosphatases, PPC:4.2.1: Calcium Dependent Protein Kinase calcium ion binding defense response to virus gene silencing by RNA nucleotide-excision repair oxidized purine nucleobase lesion DNA N-glycosylase activity ribonuclease P activity nucleolar ribonuclease P complex damaged DNA binding calcium-dependent phospholipid binding calcium-dependent protein serine/threonine kinase activity calmodulin-dependent protein kinase activity base-excision repair RNA phosphodiester bond hydrolysis, endonucleolytic peptidyl-serine phosphorylation protein autophosphorylation abscisic acid-activated signaling pathway | details |
Expression profiles
 Show details about module gene expression profiling |