TissueCFM001214's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| nucleic acid metabolic process | 0.003364814 | GO:0090304 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T005045 | - | - |
| CRO_T006002 | - | - |
| CRO_T011737 | - | - |
| CRO_T015211 | - | - |
| CRO_T016091 | - | - |
| CRO_T023392 | - | - |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM000029 | details | |
| TissueCFM000230 | clathrin vesicle coat | details |
| TissueCFM000447 | post-embryonic root development arginine biosynthetic process via ornithine urea cycle L-citrulline degradation L-arginine biosynthesis I (via L-ornithine) ornithine carbamoyltransferase activity L-arginine biosynthesis II (acetyl cycle) ornithine-citrulline shuttle ribosome biogenesis | details |
| TissueCFM000513 | details | |
| TissueCFM000562 | details | |
| TissueCFM000587 | details | |
| TissueCFM000598 | post-embryonic root development MAPK signaling pathway - yeast protein domain specific binding | details |
| TissueCFM000620 | Transcription_related, Transcription factor: Alfin-like Transcription_related, Transcription factor: PLATZ regulation of embryonic development glycyl-tRNA aminoacylation mitochondrial electron transport, ubiquinol to cytochrome c | details |
| TissueCFM000796 | details | |
| TissueCFM000833 | cellular process | details |
| TissueCFM000932 | Protein export protein transport | details |
| TissueCFM001236 | details | |
| TissueCFM001290 | post-embryonic root development MAPK signaling pathway - yeast ribosome biogenesis protein domain specific binding Ribosome biogenesis in eukaryotes | details |
| TissueCFM001304 | details | |
| TissueCFM001348 | intracellular membrane-bounded organelle | details |
| TissueCFM001352 | post-embryonic root development MAPK signaling pathway - yeast ribosome biogenesis protein domain specific binding Ribosome biogenesis in eukaryotes | details |
| TissueCFM001353 | post-embryonic root development MAPK signaling pathway - yeast protein domain specific binding | details |
| TissueCFM001433 | DNA metabolic process binding | details |
| TissueCFM001562 | details |
Expression profiles
 Show details about module gene expression profiling |