TissueCFM001256's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| formation of glycosidic bonds, GlycosylTransferases: GTnc | 0.002126245 | cazy family |
| Other types of O-glycan biosynthesis | 0.004785112 | KEGG pathway |
| arabinosyltransferase activity | 0.005213151 | GO:0052636 |
| root hair cell development | 0.006771466 | GO:0080147 |
| cell wall pectin biosynthetic process | 0.006771466 | GO:0052325 |
| carboxypeptidase activity | 0.011723524 | GO:0004180 |
| serine-type carboxypeptidase activity | 0.03033599 | GO:0004185 |
| Phenylpropanoid biosynthesis | 0.036859141 | KEGG pathway |
| protein glycosylation | 0.048049583 | GO:0006486 |
| peroxidase activity | 0.049899323 | GO:0004601 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T002898 | AT1G71695 (4.00E-123) | Peroxidase superfamily protein |
| CRO_T003780 | AT3G63470 (5.00E-135) | scpl40|serine carboxypeptidase-like 40 |
| CRO_T006933 | - | - |
| CRO_T007427 | AT3G63470 (9.00E-20) | scpl40|serine carboxypeptidase-like 40 |
| CRO_T010641 | AT3G46730 (4.00E-72) | NB-ARC domain-containing disease resistance protein |
| CRO_T033616 | - | - |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM000626 | Stilbenoid, diarylheptanoid and gingerol biosynthesis integral component of membrane drug transmembrane transporter activity antiporter activity | details |
| TissueCFM001246 | Choline metabolism in cancer Stilbenoid, diarylheptanoid and gingerol biosynthesis indole-3-acetyl-amide conjugate biosynthesis syringetin biosynthesis phenylpropanoids methylation (ice plant) ammonium transmembrane transport organic cation transport nitrogen utilization 11-O-demethyl-17-O-deacetylvindoline O-methyltransferase activity substrate-specific transmembrane transporter activity myricetin 3'-O-methyltransferase activity ammonium transmembrane transporter activity | details |
| TissueCFM001255 | Other types of O-glycan biosynthesis root hair cell development cell wall pectin biosynthetic process arabinosyltransferase activity formation of glycosidic bonds, GlycosylTransferases: GTnc Protein_kinases_phosphatases, PPC:1.7.2: Domain of Unknown Function 26 (DUF26) Kinase Phenylpropanoid biosynthesis serine-type carboxypeptidase activity non-membrane spanning protein tyrosine kinase activity protein glycosylation hydrogen peroxide catabolic process peptidyl-tyrosine phosphorylation proteolysis involved in cellular protein catabolic process | details |
Expression profiles
 Show details about module gene expression profiling |