TissueCFM001365's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| baicalein degradation (hydrogen peroxide detoxification) | 0.005846742 | plantCyc |
| wogonin metabolism | 0.005846742 | plantCyc |
| hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc | 0.006499069 | cazy family |
| Fatty acid elongation | 0.008220242 | KEGG pathway |
| Glycosaminoglycan degradation | 0.008220242 | KEGG pathway |
| MAPK signaling pathway - yeast | 0.008220242 | KEGG pathway |
| Protein_kinases_phosphatases, PPC:4.2.6: IRE/NPH/PI dependent/S6 Kinase | 0.017268235 | kinase family |
| Transcription_related, Transcription factor: MYB-related | 0.017268235 | TF family |
| very long chain fatty acid biosynthesis I | 0.021991977 | plantCyc |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T009544 | AT3G10540 (0) | 3-phosphoinositide-dependent protein kinase |
| CRO_T017822 | AT5G07830 (0) | AtGUS2|glucuronidase 2 |
| CRO_T020089 | AT4G37080 (2.00E-120) | Protein of unknown function, DUF547 |
| CRO_T022618 | AT1G77990 (0) | SULTR2; 2|SULPHATE TRANSPORTER 2; 2 |
| CRO_T023682 | AT2G26250 (0) | FDH|FIDDLEHEAD; KCS10|3-ketoacyl-CoA synthase 10 |
| CRO_T028910 | AT2G38090 (1.00E-43) | Duplicated homeodomain-like superfamily protein |
| CRO_T029258 | AT2G44770 (1.00E-121) | ELMO/CED-12 family protein |
| CRO_T029518 | - | - |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM000181 | Protein_kinases_phosphatases, PPC:1.6.2: Plant External Response Like Kinase Transcription_related, Transcription regulator: AUX/IAA ABC transporters protein tyrosine kinase activity integral component of membrane Plant hormone signal transduction antiporter activity drug transmembrane transporter activity calmodulin binding ATPase activity, coupled to transmembrane movement of substances | details |
| TissueCFM000378 | indole-3-acetate biosynthesis I Tryptophan metabolism N,N-dimethylaniline monooxygenase activity secondary active sulfate transmembrane transporter activity sulfate transmembrane transport cellular protein metabolic process response to stress NADP binding | details |
| TissueCFM000808 | detoxification of reactive carbonyls in chloroplasts MAPK signaling pathway - yeast Fatty acid metabolism Protein_kinases_phosphatases, PPC:4.2.6: IRE/NPH/PI dependent/S6 Kinase intracellular peptidyl-serine phosphorylation intracellular signal transduction | details |
| TissueCFM001012 | Transcription_related, Transcription factor: C2C2-YABBY secondary active sulfate transmembrane transporter activity maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) sulfate transmembrane transport cellular protein metabolic process Cul4-RING E3 ubiquitin ligase complex multicellular organism development small-subunit processome | details |
| TissueCFM001288 | phenylpropanoid biosynthesis, initial reactions Degradation of aromatic compounds Cytochrome_P450, Cytochrome P450: CYP73A trans-cinnamate 4-monooxygenase activity Transcription_related, Transcription regulator: LIM phenylalanine ammonia-lyase activity lignin metabolic process Protein export suberin monomers biosynthesis Transcription_related, Transcription factor: MYB-related Transcription_related, Transcription factor: MYB | details |
| TissueCFM001389 | condensed nuclear chromosome kinetochore Ndc80 complex establishment of mitotic spindle orientation attachment of mitotic spindle microtubules to kinetochore mitotic spindle organization Fatty acid elongation Lysosome Transcription_related, Transcription factor: MYB-related Transcription_related, Transcription regulator: GNAT homogalacturonan degradation very long chain fatty acid biosynthesis I N-acetyltransferase activity structural constituent of cytoskeleton transmembrane transporter activity | details |
Expression profiles
 Show details about module gene expression profiling |